Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021039
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021409-1|AAX33557.1|  580|Drosophila melanogaster LD06533p pro...    56   7e-08
AE014298-1701|AAN09303.1|  580|Drosophila melanogaster CG10347-P...    56   7e-08
AE014298-1700|AAF48103.1|  580|Drosophila melanogaster CG10347-P...    56   7e-08
AE013599-1039|AAM68774.1|  384|Drosophila melanogaster CG33478-P...    30   3.0  
AY071228-1|AAL48850.1|  326|Drosophila melanogaster RE26822p pro...    29   9.1  
AE014297-2781|AAG22161.1|  355|Drosophila melanogaster CG5085-PA...    29   9.1  
AE014134-2728|AAF53539.3|  619|Drosophila melanogaster CG4580-PA...    29   9.1  

>BT021409-1|AAX33557.1|  580|Drosophila melanogaster LD06533p
           protein.
          Length = 580

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = +2

Query: 17  DFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSFNYYY 196
           DF GYKL   ++P    EL      + P   Q+S +H +LFA HNHLV D W    +Y++
Sbjct: 16  DFSGYKLAFDSVPVLRQELGCDAYVLDPSSNQFSLLHTELFARHNHLVADPWMRHCSYFF 75

Query: 197 IDKNQQVR 220
             ++Q V+
Sbjct: 76  NKRHQLVQ 83



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
 Frame = +1

Query: 295 KPGHFNPSLTFPASNLAVVSDGTGMLHIVDTGPRNRSAGRNQLWHTLQSSLILGENKY-- 468
           + G +N ++ F +    V+ DG    H+VDTG R R+    Q W  +  S +   + +  
Sbjct: 114 RSGDYNYTIVFVSERFCVICDGITSYHLVDTGDRTRT--DVQEWQRITRSPVNNNSGHRG 171

Query: 469 FVIVDAR---IQEKKNMKL 516
           F + DAR   +QE+K + L
Sbjct: 172 FALFDARLDVLQERKQISL 190



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 534 SVQQNEKH-FESVLTWVSFDND--GESWKQMSFRQVQGKGIVHYAAIETSCSALYVASD 701
           +V Q++ H +   LTW  + +    + W     ++++  G VHY A E    +L +AS+
Sbjct: 200 AVGQDQTHVYYMDLTWARWTHSPTNDEWSYNICQRLETTGSVHYCAFEPRAESLVIASN 258


>AE014298-1701|AAN09303.1|  580|Drosophila melanogaster CG10347-PB,
           isoform B protein.
          Length = 580

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = +2

Query: 17  DFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSFNYYY 196
           DF GYKL   ++P    EL      + P   Q+S +H +LFA HNHLV D W    +Y++
Sbjct: 16  DFSGYKLAFDSVPVLRQELGCDAYVLDPSSNQFSLLHTELFARHNHLVADPWMRHCSYFF 75

Query: 197 IDKNQQVR 220
             ++Q V+
Sbjct: 76  NKRHQLVQ 83



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
 Frame = +1

Query: 295 KPGHFNPSLTFPASNLAVVSDGTGMLHIVDTGPRNRSAGRNQLWHTLQSSLILGENKY-- 468
           + G +N ++ F +    V+ DG    H+VDTG R R+    Q W  +  S +   + +  
Sbjct: 114 RSGDYNYTIVFVSERFCVICDGITSYHLVDTGDRTRT--DVQEWQRITRSPVNNNSGHRG 171

Query: 469 FVIVDAR---IQEKKNMKL 516
           F + DAR   +QE+K + L
Sbjct: 172 FALFDARLDVLQERKQISL 190



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 534 SVQQNEKH-FESVLTWVSFDND--GESWKQMSFRQVQGKGIVHYAAIETSCSALYVASD 701
           +V Q++ H +   LTW  + +    + W     ++++  G VHY A E    +L +AS+
Sbjct: 200 AVGQDQTHVYYMDLTWARWTHSPTNDEWSYNICQRLETTGSVHYCAFEPRAESLVIASN 258


>AE014298-1700|AAF48103.1|  580|Drosophila melanogaster CG10347-PA,
           isoform A protein.
          Length = 580

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = +2

Query: 17  DFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSFNYYY 196
           DF GYKL   ++P    EL      + P   Q+S +H +LFA HNHLV D W    +Y++
Sbjct: 16  DFSGYKLAFDSVPVLRQELGCDAYVLDPSSNQFSLLHTELFARHNHLVADPWMRHCSYFF 75

Query: 197 IDKNQQVR 220
             ++Q V+
Sbjct: 76  NKRHQLVQ 83



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
 Frame = +1

Query: 295 KPGHFNPSLTFPASNLAVVSDGTGMLHIVDTGPRNRSAGRNQLWHTLQSSLILGENKY-- 468
           + G +N ++ F +    V+ DG    H+VDTG R R+    Q W  +  S +   + +  
Sbjct: 114 RSGDYNYTIVFVSERFCVICDGITSYHLVDTGDRTRT--DVQEWQRITRSPVNNNSGHRG 171

Query: 469 FVIVDAR---IQEKKNMKL 516
           F + DAR   +QE+K + L
Sbjct: 172 FALFDARLDVLQERKQISL 190



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 534 SVQQNEKH-FESVLTWVSFDND--GESWKQMSFRQVQGKGIVHYAAIETSCSALYVASD 701
           +V Q++ H +   LTW  + +    + W     ++++  G VHY A E    +L +AS+
Sbjct: 200 AVGQDQTHVYYMDLTWARWTHSPTNDEWSYNICQRLETTGSVHYCAFEPRAESLVIASN 258


>AE013599-1039|AAM68774.1|  384|Drosophila melanogaster CG33478-PB,
           isoform B protein.
          Length = 384

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 445 LILGENKYFVIVDARIQEKKNMKL--CIAYFNQFNKMKNILSLFLLG 579
           L+L   K   +++ +  EK  M+L  C AY+N+  + K+++ LF+ G
Sbjct: 208 LVLRLEKLGPVIEPQDNEKIAMELRECAAYYNRIVRFKDLVELFIKG 254


>AY071228-1|AAL48850.1|  326|Drosophila melanogaster RE26822p
           protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 513 TLHCLLQSVQQNEKHFESVLTWVSFDNDGESWKQMSFRQV---QGKGIVHYAAIETSCSA 683
           TLH    S  + E   E V+  +SFD   E W+   FR++    G GI   A I    S 
Sbjct: 42  TLHLGGSSDAKEEVKVEKVIPDLSFDGFAEHWRVHGFRKIVTMVGAGISTSAGIPDFRSP 101

Query: 684 LYVASDNIFKFTMDSETEI 740
                 N+ K+ +   T I
Sbjct: 102 GSGLYSNLKKYELPHPTAI 120


>AE014297-2781|AAG22161.1|  355|Drosophila melanogaster CG5085-PA
           protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 513 TLHCLLQSVQQNEKHFESVLTWVSFDNDGESWKQMSFRQV---QGKGIVHYAAIETSCSA 683
           TLH    S  + E   E V+  +SFD   E W+   FR++    G GI   A I    S 
Sbjct: 11  TLHLGGSSDAKEEVKVEKVIPDLSFDGFAEHWRVHGFRKIVTMVGAGISTSAGIPDFRSP 70

Query: 684 LYVASDNIFKFTMDSETEI 740
                 N+ K+ +   T I
Sbjct: 71  GSGLYSNLKKYELPHPTAI 89


>AE014134-2728|AAF53539.3|  619|Drosophila melanogaster CG4580-PA
           protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 570 LTWVSFDNDGESWKQMSFRQVQGKGIVH 653
           LTW  F  DG SW Q +F+ ++    +H
Sbjct: 125 LTWPQFIPDGSSWPQENFKWLKALAHLH 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,864,861
Number of Sequences: 53049
Number of extensions: 687217
Number of successful extensions: 1550
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)