Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021037
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -1

Query: 402 IVLYSITISAFCYCF 358
           ++ ++  + AFCYC+
Sbjct: 543 LIQFNTIVFAFCYCY 557


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 307 VLYHTNVEHYYRCLGDFQYLRAECSYFIDILAKFIHFFLHY 185
           VL+HT     +  +    Y       F    A+FI +FL Y
Sbjct: 122 VLFHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQFIVYFLIY 162


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 292 NVEHYYRCLGD 260
           N+ +YYR LGD
Sbjct: 222 NIANYYRILGD 232


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 185 IMQEEMNKLSENINKITTF 241
           ++Q EM + S NIN ++TF
Sbjct: 346 MIQFEMTQNSTNINFVSTF 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,235
Number of Sequences: 336
Number of extensions: 3900
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)