Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021036
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5848| Best HMM Match : DUF589 (HMM E-Value=5.4) 35 0.061
SB_115| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 32 0.43
SB_27754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_11353| Best HMM Match : PPR (HMM E-Value=0.001) 30 2.3
SB_48558| Best HMM Match : HEPN (HMM E-Value=6) 29 3.0
SB_43175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_57720| Best HMM Match : DUF222 (HMM E-Value=3.3) 29 4.0
SB_53861| Best HMM Match : LIM (HMM E-Value=0.93) 28 7.0
SB_11642| Best HMM Match : LIM (HMM E-Value=1.4) 28 7.0
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 28 7.0
SB_31516| Best HMM Match : ATP-synt_E (HMM E-Value=7.1) 28 9.3
SB_20194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_5848| Best HMM Match : DUF589 (HMM E-Value=5.4)
Length = 463
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 411 PEQRTLLVQKIWSV-LTERGIAMDISHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQIG 587
P QR V+K+W + T+ + D + + L N SR+H + + +K ++I
Sbjct: 366 PRQRATAVRKVWDIEKTKAALGRDTTSGILFVHALLGCNTTSRIHGIWKGVALK-RAKIS 424
Query: 588 SPIRDSCGVIAKREMSR 638
R+ GV + + SR
Sbjct: 425 KQFRELAGVFSSADSSR 441
>SB_115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 426 LLVQKIWSVLTERGIAMDISHYNALLRVTLKTNIHSRLH 542
LL Q + ++L E GIAMDI +YN + + K N+H L+
Sbjct: 147 LLSQIVVNILQEAGIAMDI-NYNYKVYIVKKNNLHGPLY 184
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 90 EIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
EI+ V Y CCK ++ C+ + C L + +CC
Sbjct: 122 EIQEVKYDCCKEVKYDCCKEVKYDCCKDL-TYECC 155
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 45 CTQSNYSHVVVVEINEIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
C + Y V+ + + V Y CCK+ +E C+ + C ++ CC
Sbjct: 278 CKEVKYDCCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEV-KYDCC 326
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 39 IECTQSNYSHVVVVEINEIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
+E + Y V+ + + V Y CCK+ +E C+ + C ++ CC
Sbjct: 121 VEIQEVKYDCCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEV-KYDCC 171
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +3
Query: 45 CTQSNYSHVVVVEINEIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
C Y V+ + + V Y CCK+ ++ C+ ++ C ++ CC
Sbjct: 147 CKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCCKEV-KYDCC 195
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +3
Query: 45 CTQSNYSHVVVVEINEIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
C Y V+ + + V Y CCK+ ++ C+ ++ C ++ CC
Sbjct: 302 CKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCCKEV-KYDCC 350
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +3
Query: 45 CTQSNYSHVVVVEINEIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
C + Y V+ + + + Y CCK ++ C+ + C L + CC
Sbjct: 131 CKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDL-TYDCC 179
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +3
Query: 45 CTQSNYSHVVVVEINEIRSVLYGCCKNTYFEFCENCRSQCIPQL*SLKCC 194
C + Y V+ + + + Y CCK ++ C+ + C L + CC
Sbjct: 286 CKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDL-TYDCC 334
>SB_27754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 336 SKNDITSSQSLLVIRCCGELVPEELPEQRTLLVQKIWSVLTERGIAMDISH-YNALLRVT 512
S + + L RC L EE + TL IW V R +A+ ++H YN L+ V
Sbjct: 143 SSDSMVKVYDLSTGRCTLRLTMEEFTSRSTL----IWGVYITRLVAVHVTHLYNRLVAVH 198
Query: 513 LKTNIHSRL 539
+ T++++RL
Sbjct: 199 V-THLYNRL 206
>SB_11353| Best HMM Match : PPR (HMM E-Value=0.001)
Length = 41
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPN 583
++ Y++N + F+P + L +++ GL+PN
Sbjct: 12 LLSVYLQNGYKFNPLEVLERIQSSGLEPN 40
>SB_48558| Best HMM Match : HEPN (HMM E-Value=6)
Length = 119
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 447 SVLTERGIAMDISHYNALLRVTLKTNIHSRLH 542
++L E GIAMDI YN + + K N+H L+
Sbjct: 56 NILQEAGIAMDID-YNYKVYIVKKNNLHEPLY 86
>SB_43175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 401 RRATRTKNLTCTENMECFNRKRNRNGHLSLQCIVESY 511
R + K C E ECFN+ RN HL++ ++Y
Sbjct: 191 RMHSAQKTYKCDECGECFNQSRNLKTHLTIHSGQKAY 227
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 542 QFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLG 718
Q L E++ +GLQ + Y L+ Q+ ++ A K+ +MR++ S AL+ G
Sbjct: 191 QSLREMQAEGLQTHARNYHPLILSAVQQQSLQVAFKLCNEMRDIERRPSYRCYTALIDG 249
>SB_57720| Best HMM Match : DUF222 (HMM E-Value=3.3)
Length = 252
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 560 ENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVS 688
EN G QP+ R + C++G + GA+ ++ +R+ P +
Sbjct: 54 ENLGAQPHAHIDMRAAYLGCEDGVIGGASDAIDLVRKYGFPTN 96
>SB_53861| Best HMM Match : LIM (HMM E-Value=0.93)
Length = 968
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 539 AQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVS 688
AQ EN G QP+ R + C++ GA+ ++ +R+ P S
Sbjct: 375 AQLWNSKENLGTQPHAHIDMRAAYLGCEDSVFGGASDAIDLVRKYGFPTS 424
>SB_11642| Best HMM Match : LIM (HMM E-Value=1.4)
Length = 906
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 515 ENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVS 688
EN P +P ++ EN G QP+ R + C++ GA+ ++ +R+ P +
Sbjct: 324 ENIRP-TPLRYRDVWENLGAQPHAHIDMRAAYLGCEDSVFGGASDAIDLVRKYGFPTN 380
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +2
Query: 503 ESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMP 682
+ YIE H + ++ EN G Q + R + C++ GA+ ++ +R+ P
Sbjct: 830 QEYIEATHRWVESKVWNSKENLGAQTHAHIEMRAAYLGCEDSVFGGASDAVDLVRKYGFP 889
Query: 683 VS 688
+
Sbjct: 890 TN 891
>SB_31516| Best HMM Match : ATP-synt_E (HMM E-Value=7.1)
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 231 ENRKP*PSLQKLDSEVRRYGRITKRDIDEVLDEI 332
E P +LDS +Y T+RDID +LD +
Sbjct: 29 ERPSPLKPPMRLDSSGEQYMYFTERDIDRILDNL 62
>SB_20194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 557 LENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVS 688
+EN G QP+ Y R + C++ G + ++ +R+ P +
Sbjct: 161 MENLGAQPHAHIYMRAAYLGCEDSVSGGGSDAIDVVRKYGFPTN 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,088,840
Number of Sequences: 59808
Number of extensions: 446701
Number of successful extensions: 1396
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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