Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021036
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M92439-1|AAA67549.1| 1273|Homo sapiens leucine-rich PPR-motif co... 97 6e-20
BC130285-1|AAI30286.1| 1394|Homo sapiens leucine-rich PPR-motif ... 97 6e-20
BC050311-1|AAH50311.1| 1394|Homo sapiens leucine-rich PPR-motif ... 97 6e-20
BC026034-1|AAH26034.1| 531|Homo sapiens LRPPRC protein protein. 97 6e-20
AY289212-1|AAP41922.1| 1394|Homo sapiens leucine-rich PPR motif-... 97 6e-20
AK125781-1|BAC86287.1| 1394|Homo sapiens protein ( Homo sapiens ... 97 6e-20
AC127379-1|AAY24043.1| 549|Homo sapiens unknown protein. 97 6e-20
DQ063585-1|AAY64450.1| 1517|Homo sapiens B-aggressive lymphoma 2... 31 4.4
DQ063584-1|AAY64449.1| 1638|Homo sapiens B-aggressive lymphoma 2... 31 4.4
AB033094-1|BAA86582.1| 1023|Homo sapiens KIAA1268 protein protein. 31 4.4
AK001770-1|BAA91897.1| 556|Homo sapiens protein ( Homo sapiens ... 30 7.7
>M92439-1|AAA67549.1| 1273|Homo sapiens leucine-rich PPR-motif
containing protein protein.
Length = 1273
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 47 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 106
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 107 LPVTEAVFSALVTGHARAGDMENA 130
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 375 IRCCGELVPEELPEQRTLLVQKIWSVLTERGIAMDISHYNALLRVTLK 518
+R CG L+PE E+RT +IW L + G D+SHYNALL+V L+
Sbjct: 6 LRSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQ 53
Score = 34.3 bits (75), Expect = 0.47
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 134 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSK 193
Query: 728 HG 733
G
Sbjct: 194 AG 195
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 67 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 123
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 124 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 163
>BC130285-1|AAI30286.1| 1394|Homo sapiens leucine-rich PPR-motif
containing protein.
Length = 1394
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 168 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 227
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 228 LPVTEAVFSALVTGHARAGDMENA 251
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 252 SLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLL 431
+L +LD VRR GRI K+ + +V ++ + S +LL++R CG L+PE E+RT
Sbjct: 86 ALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEF 145
Query: 432 VQKIWSVLTERGIAMDISHYNALLRVTLK 518
+IW L + G D+SHYNALL+V L+
Sbjct: 146 AHRIWDTLQKLGAVYDVSHYNALLKVYLQ 174
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 255 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSK 314
Query: 728 HG 733
G
Sbjct: 315 AG 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 188 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 244
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 245 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 284
>BC050311-1|AAH50311.1| 1394|Homo sapiens leucine-rich PPR-motif
containing protein.
Length = 1394
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 168 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 227
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 228 LPVTEAVFSALVTGHARAGDMENA 251
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 252 SLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLL 431
+L +LD VRR GRI K+ + +V ++ + S +LL++R CG L+PE E+RT
Sbjct: 86 ALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEF 145
Query: 432 VQKIWSVLTERGIAMDISHYNALLRVTLK 518
+IW L + G D+SHYNALL+V L+
Sbjct: 146 AHRIWDTLQKLGAVYDVSHYNALLKVYLQ 174
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 255 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSK 314
Query: 728 HG 733
G
Sbjct: 315 AG 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 188 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 244
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 245 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 284
>BC026034-1|AAH26034.1| 531|Homo sapiens LRPPRC protein protein.
Length = 531
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 168 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 227
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 228 LPVTEAVFSALVTGHARAGDMENA 251
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 252 SLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLL 431
+L +LD VRR GRI K+ + +V ++ + S +LL++R CG L+PE E+RT
Sbjct: 86 ALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEF 145
Query: 432 VQKIWSVLTERGIAMDISHYNALLRVTLK 518
+IW L + G D+SHYNALL+V L+
Sbjct: 146 AHRIWDTLQKLGAVYDVSHYNALLKVYLQ 174
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 255 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSK 314
Query: 728 HG 733
G
Sbjct: 315 AG 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 188 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 244
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 245 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 284
>AY289212-1|AAP41922.1| 1394|Homo sapiens leucine-rich PPR
motif-containing protein protein.
Length = 1394
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 168 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 227
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 228 LPVTEAVFSALVTGHARAGDMENA 251
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 252 SLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLL 431
+L +LD VRR GRI K+ + +V ++ + S +LL++R CG L+PE E+RT
Sbjct: 86 ALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEF 145
Query: 432 VQKIWSVLTERGIAMDISHYNALLRVTLK 518
+IW L + G D+SHYNALL+V L+
Sbjct: 146 AHRIWDTLQKLGAVYDVSHYNALLKVYLQ 174
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 255 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSK 314
Query: 728 HG 733
G
Sbjct: 315 AG 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 188 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 244
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 245 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 284
>AK125781-1|BAC86287.1| 1394|Homo sapiens protein ( Homo sapiens
cDNA FLJ43793 fis, clone TESTI4000014, highly similar
to 130 kDa leucine-rich protein. ).
Length = 1394
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 168 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 227
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 228 LPVTEAVFSALVTGHARAGDMENA 251
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 252 SLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLL 431
+L +LD VRR GRI K+ + +V ++ + S +LL++R CG L+PE E+RT
Sbjct: 86 ALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEF 145
Query: 432 VQKIWSVLTERGIAMDISHYNALLRVTLK 518
+IW L + G D+SHYNALL+V L+
Sbjct: 146 AHRIWDTLQKLGAVYDVSHYNALLKVYLQ 174
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 255 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSK 314
Query: 728 HG 733
G
Sbjct: 315 AG 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 188 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 244
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 245 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 284
>AC127379-1|AAY24043.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 97.1 bits (231), Expect = 6e-20
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
+++ Y++N++ FSP FL ++E +QPNRVTYQRL+ YC GD+EGA+K+L M+
Sbjct: 168 LLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKD 227
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V +ALV GHA GD E A
Sbjct: 228 LPVTEAVFSALVTGHARAGDMENA 251
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 252 SLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLL 431
+L +LD VRR GRI K+ + +V ++ + S +LL++R CG L+PE E+RT
Sbjct: 86 ALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEF 145
Query: 432 VQKIWSVLTERGIAMDISHYNALLRVTLK 518
+IW L + G D+SHYNALL+V L+
Sbjct: 146 AHRIWDTLQKLGAVYDVSHYNALLKVYLQ 174
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 548 LTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAF 727
LT + + G++P TY L+ Y ++GD++ + LEK+ + + + + L ++ +
Sbjct: 255 LTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSK 314
Query: 728 HG 733
G
Sbjct: 315 AG 316
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 443 MECFNRKRNRNGHLSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQ 622
ME N + NR ++ Q ++ SY ++ L ++ K L + L+ + +
Sbjct: 188 MEEANIQPNR---VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 244
Query: 623 EGDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTE 742
GD+E A +L MR+ + AL+ +A GD +
Sbjct: 245 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 284
>DQ063585-1|AAY64450.1| 1517|Homo sapiens B-aggressive lymphoma 2A
protein.
Length = 1517
Score = 31.1 bits (67), Expect = 4.4
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +3
Query: 288 GRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLVQKIWSVLTERG 467
G ITK + D +++ + ++ + S ++ C G+ V E +Q +K ++T G
Sbjct: 1071 GDITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQ--QRKNDYIITGGG 1128
Query: 468 IAMDISHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQIGSP 593
++ V ++ S + S LQ + K+YS I P
Sbjct: 1129 FL----RCKNIIHVIGGNDVKSSVSSVLQECEKKNYSSICLP 1166
>DQ063584-1|AAY64449.1| 1638|Homo sapiens B-aggressive lymphoma 2B
protein.
Length = 1638
Score = 31.1 bits (67), Expect = 4.4
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +3
Query: 288 GRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLVQKIWSVLTERG 467
G ITK + D +++ + ++ + S ++ C G+ V E +Q +K ++T G
Sbjct: 1071 GDITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQ--QRKNDYIITGGG 1128
Query: 468 IAMDISHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQIGSP 593
++ V ++ S + S LQ + K+YS I P
Sbjct: 1129 FL----RCKNIIHVIGGNDVKSSVSSVLQECEKKNYSSICLP 1166
>AB033094-1|BAA86582.1| 1023|Homo sapiens KIAA1268 protein protein.
Length = 1023
Score = 31.1 bits (67), Expect = 4.4
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +3
Query: 288 GRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLVQKIWSVLTERG 467
G ITK + D +++ + ++ + S ++ C G+ V E +Q +K ++T G
Sbjct: 577 GDITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQ--QRKNDYIITGGG 634
Query: 468 IAMDISHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQIGSP 593
++ V ++ S + S LQ + K+YS I P
Sbjct: 635 FL----RCKNIIHVIGGNDVKSSVSSVLQECEKKNYSSICLP 672
>AK001770-1|BAA91897.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ10908 fis, clone OVARC1000087, weakly similar to
HISTONE MACRO-H2A.1. ).
Length = 556
Score = 30.3 bits (65), Expect = 7.7
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +3
Query: 288 GRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLVQKIWSVLTERG 467
G ITK + D +++ + ++ + S ++ C G+ V E +Q +K ++T G
Sbjct: 230 GDITKGEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQ--QRKNDYIITGGG 287
Query: 468 IAMDISHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQIGSP 593
++ V ++ S + S LQ + K+YS I P
Sbjct: 288 FL----RCKNIIHVIGGNDVKSSVSSVLQECEKKNYSSICLP 325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,111,084
Number of Sequences: 237096
Number of extensions: 2126196
Number of successful extensions: 5730
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5730
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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