Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021036
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P... 126 3e-29
AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro... 124 1e-28
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ... 124 1e-28
BT021204-1|AAX33352.1| 1072|Drosophila melanogaster UT01249p pro... 41 0.002
AL035632-3|CAB38464.1| 1072|Drosophila melanogaster EG:BACN32G11... 41 0.002
AE014298-208|AAF45626.1| 1072|Drosophila melanogaster CG14786-PA... 41 0.002
BT011031-1|AAR30191.1| 703|Drosophila melanogaster RE45108p pro... 31 1.3
AE014296-927|AAF50798.1| 703|Drosophila melanogaster CG4611-PA ... 31 1.3
AE014298-1070|AAF46281.1| 542|Drosophila melanogaster CG15325-P... 30 3.9
>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
protein.
Length = 1412
Score = 126 bits (304), Expect = 3e-29
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +3
Query: 255 LQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLV 434
+++LD +VRR GRI++RD++EVLDEI+S TSSQSLLVIRCCG LVPEELPE RT LV
Sbjct: 65 IRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGNLVPEELPEVRTALV 124
Query: 435 QKIWSVLTERGIAMDISHYNALLRVTLK 518
Q+IW L + MDISHYNALLRV L+
Sbjct: 125 QEIWKTLNALNVPMDISHYNALLRVYLE 152
Score = 113 bits (272), Expect = 2e-25
Identities = 48/84 (57%), Positives = 66/84 (78%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
++ Y+EN+H F+P FL E+E KG++PNRVTYQRL+ RYCQ+GD+EGAT++LE MR S
Sbjct: 146 LLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKS 205
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V N+L+LGH+ D E A
Sbjct: 206 LPVNENVFNSLILGHSQANDLESA 229
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 67 MSSLLRSTKFVRYFTGAARTLILNSVKTAEASAFLNSKALSAA--NNVFVRDYATTKKTE 240
M+S+LR+ K +RYF G R +++NSV+ E S LN+ N F + A K
Sbjct: 1 MASILRTGKLLRYFAGFTRNVLVNSVRENETSNLLNNAPCMCGQFQNGFATN-AAAKAEL 59
Query: 241 SLDPLFR 261
SLD R
Sbjct: 60 SLDKQIR 66
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/85 (22%), Positives = 34/85 (40%)
Frame = +2
Query: 482 LSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEK 661
++ Q ++ Y + + L + K L N + L+ + Q D+E A +L
Sbjct: 176 VTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGV 235
Query: 662 MRELSMPVSEPVLNALVLGHAFHGD 736
M + + S L+ A HGD
Sbjct: 236 MMQAGLEPSADTYTTLLCAFARHGD 260
>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
protein.
Length = 1412
Score = 124 bits (299), Expect = 1e-28
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +3
Query: 255 LQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLV 434
+++LD +VRR GRI++RD++EVLDEI+S TSSQSLLVIRCCG LVPEELPE RT LV
Sbjct: 65 IRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGNLVPEELPEVRTALV 124
Query: 435 QKIWSVLTERGIAMDISHYNALLRVTLK 518
Q+IW L + M+ISHYNALLRV L+
Sbjct: 125 QEIWKTLNALNVPMNISHYNALLRVYLE 152
Score = 113 bits (272), Expect = 2e-25
Identities = 48/84 (57%), Positives = 66/84 (78%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
++ Y+EN+H F+P FL E+E KG++PNRVTYQRL+ RYCQ+GD+EGAT++LE MR S
Sbjct: 146 LLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKS 205
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V N+L+LGH+ D E A
Sbjct: 206 LPVNENVFNSLILGHSQANDLESA 229
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 67 MSSLLRSTKFVRYFTGAARTLILNSVKTAEASAFLNSKALSAA--NNVFVRDYATTKKTE 240
M+S+LR+ K +RYF G R +++NSV+ E S LN+ N F + A K
Sbjct: 1 MASILRTGKLLRYFAGFTRNVLVNSVRENETSNLLNNAPCMCGQFQNGFATN-AAAKAEL 59
Query: 241 SLDPLFR 261
SLD R
Sbjct: 60 SLDKQIR 66
Score = 32.3 bits (70), Expect = 0.73
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = +2
Query: 482 LSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEK 661
++ Q ++ Y + + L + K L N + L+ + Q D+E A +L
Sbjct: 176 VTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGV 235
Query: 662 MRELSMPVSEPVLNALVLGHAFHGD 736
M++ + S L+ A HGD
Sbjct: 236 MKQAGLEPSADTYTTLLCAFARHGD 260
>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
stability factor protein.
Length = 1412
Score = 124 bits (299), Expect = 1e-28
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +3
Query: 255 LQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLV 434
+++LD +VRR GRI++RD++EVLDEI+S TSSQSLLVIRCCG LVPEELPE RT LV
Sbjct: 65 IRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGNLVPEELPEVRTALV 124
Query: 435 QKIWSVLTERGIAMDISHYNALLRVTLK 518
Q+IW L + M+ISHYNALLRV L+
Sbjct: 125 QEIWKTLNALNVPMNISHYNALLRVYLE 152
Score = 113 bits (272), Expect = 2e-25
Identities = 48/84 (57%), Positives = 66/84 (78%)
Frame = +2
Query: 497 IVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELS 676
++ Y+EN+H F+P FL E+E KG++PNRVTYQRL+ RYCQ+GD+EGAT++LE MR S
Sbjct: 146 LLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKS 205
Query: 677 MPVSEPVLNALVLGHAFHGDTEGA 748
+PV+E V N+L+LGH+ D E A
Sbjct: 206 LPVNENVFNSLILGHSQANDLESA 229
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 67 MSSLLRSTKFVRYFTGAARTLILNSVKTAEASAFLNSKALSAA--NNVFVRDYATTKKTE 240
M+S+LR+ K +RYF G R +++NSV+ E S LN+ N F + A K
Sbjct: 1 MASILRTGKLLRYFAGFTRNVLVNSVRENETSNLLNNAPCMCGQFQNGFATN-AAAKAEL 59
Query: 241 SLDPLFR 261
SLD R
Sbjct: 60 SLDKQIR 66
Score = 32.3 bits (70), Expect = 0.73
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = +2
Query: 482 LSLQCIVESYIENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEK 661
++ Q ++ Y + + L + K L N + L+ + Q D+E A +L
Sbjct: 176 VTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGV 235
Query: 662 MRELSMPVSEPVLNALVLGHAFHGD 736
M++ + S L+ A HGD
Sbjct: 236 MKQAGLEPSADTYTTLLCAFARHGD 260
>BT021204-1|AAX33352.1| 1072|Drosophila melanogaster UT01249p
protein.
Length = 1072
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 626 GDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTEGA 748
G++ AT++L +MRE S+ ++E +AL+LGHA GD GA
Sbjct: 212 GNMRMATEILSEMRERSLALTEHNFHALLLGHARSGDLPGA 252
>AL035632-3|CAB38464.1| 1072|Drosophila melanogaster EG:BACN32G11.3
protein.
Length = 1072
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 626 GDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTEGA 748
G++ AT++L +MRE S+ ++E +AL+LGHA GD GA
Sbjct: 212 GNMRMATEILSEMRERSLALTEHNFHALLLGHARSGDLPGA 252
>AE014298-208|AAF45626.1| 1072|Drosophila melanogaster CG14786-PA
protein.
Length = 1072
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 626 GDVEGATKVLEKMRELSMPVSEPVLNALVLGHAFHGDTEGA 748
G++ AT++L +MRE S+ ++E +AL+LGHA GD GA
Sbjct: 212 GNMRMATEILSEMRERSLALTEHNFHALLLGHARSGDLPGA 252
>BT011031-1|AAR30191.1| 703|Drosophila melanogaster RE45108p
protein.
Length = 703
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 539 AQFLTE-LENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALV 712
AQ L E + KG +PN Y ++ Y + GDV+ A + ++M E + ++ N L+
Sbjct: 242 AQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLL 300
>AE014296-927|AAF50798.1| 703|Drosophila melanogaster CG4611-PA
protein.
Length = 703
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 539 AQFLTE-LENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEPVLNALV 712
AQ L E + KG +PN Y ++ Y + GDV+ A + ++M E + ++ N L+
Sbjct: 242 AQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLL 300
>AE014298-1070|AAF46281.1| 542|Drosophila melanogaster CG15325-PA
protein.
Length = 542
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 483 SHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQI 584
S Y+ALL L+ ++H RL +LQ+L DY+ +
Sbjct: 336 SMYSALLFFILRYHLHQRLPGNLQDLTHGDYAAV 369
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,841,175
Number of Sequences: 53049
Number of extensions: 663852
Number of successful extensions: 2078
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2078
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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