Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021036
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81546-4|CAB04453.1| 184|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 2.7
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 6.2
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 6.2
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 28 6.2
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 28 6.2
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024882-4|AAF60933.2| 338|Caenorhabditis elegans Seven tm rece... 28 6.2
Z81127-3|CAB03388.2| 310|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 8.1
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 515 ENQHPFSPAQFLTELENKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRELSMPVSEP 694
EN+ + P + L +E G++P T+ ++ R GDV+G ++ M V
Sbjct: 166 ENEVDWDPLKELDNMERSGVEPTIETFHAVVKRISASGDVDGCKNMVYNMARKGFSVDAH 225
Query: 695 VLNALVLGHAFHG 733
+ A V + G
Sbjct: 226 INAASVFAFSIRG 238
>Z81546-4|CAB04453.1| 184|Caenorhabditis elegans Hypothetical
protein F53A2.5 protein.
Length = 184
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 516 KTNIHSRLHSSLQNLKIK-DYSQIGSPIRDSCGVIAKREMSREQPK 650
KT H + +LQNL DY + + D+C V A++++ R+ +
Sbjct: 73 KTIYHEHVQKALQNLGFTPDYLEAADSVLDACKVEAEKKLRRKNSR 118
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +3
Query: 255 LQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQRTLLV 434
+Q DS++ R E+L E ++ + SSQ LV R EEL EQ+ +
Sbjct: 429 MQIRDSQIIPEEEEKLRKSRELLAETKANQEKKSSQKHLVERFSAN---EELIEQKLTSI 485
Query: 435 QKIWSVLTERG 467
+K+ +LTE G
Sbjct: 486 EKLHQLLTELG 496
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 203
C+NT +F C+ QC PQ L S C QC
Sbjct: 402 CQNTCQQFAPVCQQQCAPQCTLPSAPACQQC 432
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 297 TKRDIDEV---LDEIQSKNDITSSQSLLVIRCCGELVPEE 407
TK +I E D+IQSK+D+TS L RC +P E
Sbjct: 672 TKTEISEENPKTDDIQSKDDVTSKSELHCYRCEHYQLPAE 711
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 297 TKRDIDEV---LDEIQSKNDITSSQSLLVIRCCGELVPEE 407
TK +I E D+IQSK+D+TS L RC +P E
Sbjct: 669 TKTEISEENPKTDDIQSKDDVTSKSELHCYRCEHYQLPAE 708
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 203
C+NT ++ C+ QC PQ L S C QC
Sbjct: 262 CQNTCQQYAPVCQQQCAPQCTLPSAPACQQC 292
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 203
C+NT ++ C+ QC PQ L S C QC
Sbjct: 263 CQNTCQQYAPVCQQQCAPQCTLPSAPACQQC 293
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 203
C+NT ++ C+ QC PQ L S C QC
Sbjct: 178 CQNTCQQYAPVCQQQCTPQCTLPSAPACQQC 208
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 203
C+NT ++ C+ QC PQ L S C QC
Sbjct: 178 CQNTCQQYAPVCQQQCAPQCTLPSAPACQQC 208
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 203
C+NT ++ C+ QC PQ L S C QC
Sbjct: 178 CQNTCQQYAPVCQQQCTPQCTLPSAPACQQC 208
>AC024882-4|AAF60933.2| 338|Caenorhabditis elegans Seven tm
receptor protein 158 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +3
Query: 402 EELPEQRTLLVQKIWSVLTERGIAMDISHYNALLRVTLKTNIHSRLHSSLQNLKIKDYSQ 581
+E+ E + + K++++ +R IS+ L T N+H RL L+ +K +
Sbjct: 159 DEMTEHLRINLSKLYNLDVDR-----ISYIGLLFWTTRSGNLHLRLEDLLKYFALKGFMM 213
Query: 582 IGSPIRDSCGVIA 620
I I CGV++
Sbjct: 214 IPFCIIIYCGVMS 226
>Z81127-3|CAB03388.2| 310|Caenorhabditis elegans Hypothetical
protein T22G5.3 protein.
Length = 310
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 210 TRLCNNKENRKP*PSLQKLDSEVRRYG-RITKRDIDEVLDEIQSKN--DITSSQSL 368
T+L NN N L D+++ + I D+D++LD IQ+KN D+ Q L
Sbjct: 240 TKLTNNDLNAYIKKWLDGADTKLESFKIEIEDPDLDKILDGIQTKNAEDVQRKQDL 295
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 117 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QCFCT 212
C+NT +F C+ QC PQ + S C QC T
Sbjct: 177 CQNTCQQFAPVCQQQCAPQCTISSAPQCQQCQTT 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,608,867
Number of Sequences: 27780
Number of extensions: 351145
Number of successful extensions: 1073
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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