Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021036
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.0  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   7.1  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   7.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   7.1  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   7.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   7.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   7.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 512 IENQHPFSPAQFLTELENKGL 574
           ++  +PF+P  F++ LEN  L
Sbjct: 173 LKETYPFNPVLFISSLENISL 193


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 512 IENQHPFSPAQFLTELENKGL 574
           ++  +PF+P  F++ LEN  L
Sbjct: 211 LKETYPFNPVLFISSLENISL 231


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -2

Query: 545 TVQARMDVGFQCNSQQCIVVRDVHCDSSFC*N 450
           T+Q R+D      +++  +++ + C   FC N
Sbjct: 142 TLQNRLDEAILIKNERICILKSITCALQFCHN 173


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +3

Query: 303 RDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQ 419
           +D+D +   I+   D+T+      ++   +LVP    +Q
Sbjct: 88  KDVDPIFGTIKDLEDLTAEAKKQNLKVILDLVPNHTSDQ 126


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 408 LPEQRTLLVQKIWSVLTERGIAMDISHYNALLR 506
           L E++  LVQ  W+V+ +  +A  I+   A  +
Sbjct: 24  LTERQKKLVQNTWAVVRKDEVASGIAVMTAFFK 56


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 408 LPEQRTLLVQKIWSVLTERGIAMDISHYNALLR 506
           L E++  LVQ  W+V+ +  +A  I+   A  +
Sbjct: 24  LTERQKKLVQNTWAVVRKDEVASGIAVMTAFFK 56


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +3

Query: 402 EELPEQRTLLVQKIWSVLTERGIAMDISHYNALLRVTLK 518
           EEL  +R + +     ++ + G+A D ++ N +L++  K
Sbjct: 301 EELLGKRNICIAIKEKLVKDSGVAKDAAYDNIVLKLLTK 339


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 300 KRDIDEVLDEIQSK 341
           K+ ++E+LDEI+ K
Sbjct: 120 KKSLEEILDEIKKK 133


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 300 KRDIDEVLDEIQSK 341
           K+ ++E+LDEI+ K
Sbjct: 120 KKSLEEILDEIKKK 133


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 300 KRDIDEVLDEIQSK 341
           K+ ++E+LDEI+ K
Sbjct: 120 KKSLEEILDEIKKK 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,528
Number of Sequences: 438
Number of extensions: 4200
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)