Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021034
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 125 4e-29
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 81 8e-16
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 57 2e-08
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 56 3e-08
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 56 5e-08
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 54 1e-07
04_01_0103 + 1082077-1082167,1083037-1085477 54 2e-07
02_04_0017 + 18937774-18937864,18938505-18940945 54 2e-07
01_06_0662 + 30987187-30987277,30987825-30990214 54 2e-07
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 53 3e-07
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 53 3e-07
03_05_0511 + 25056018-25059107 48 7e-06
02_04_0148 - 20198407-20201424 47 2e-05
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 46 3e-05
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 40 0.002
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 38 0.008
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 38 0.010
02_04_0462 + 23131433-23132836 36 0.040
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 34 0.16
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 33 0.38
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 32 0.50
05_03_0513 + 14919136-14920881 30 2.0
06_01_1112 - 9157776-9158149,9158248-9161158 30 2.7
04_04_0566 + 26273708-26273805,26274855-26274983,26275581-262756... 30 2.7
07_03_0897 - 22389116-22389600,22389611-22389728 29 3.5
10_08_0393 + 17517511-17517777,17518913-17518987,17519080-175191... 29 4.6
01_05_0737 - 24780952-24781100,24781515-24783453 29 4.6
08_02_1581 - 28004060-28004449,28004730-28004888,28004933-280050... 28 8.1
06_01_0602 - 4342333-4342790,4342899-4345623 28 8.1
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624... 28 8.1
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 125 bits (302), Expect = 4e-29
Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 13/115 (11%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHVDFT+EVERALRVLDGAILVLCSVGGVQSQ++TV+RQM+RY +P +AFINKLDR+GA
Sbjct: 144 PGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEIPRVAFINKLDRMGA 203
Query: 183 NPERVLKQM-------------RSKLKHNAAFIHLPIA*KKSVKEFWTLLRRKLY 308
+P +VL Q+ RSKL+H+ A + +PI ++ + L+ K Y
Sbjct: 204 DPWKVLNQIVSGAETPDTQLMARSKLRHHNAAVQVPIGLEEEFEGLVDLVELKAY 258
Score = 104 bits (249), Expect = 1e-22
Identities = 59/123 (47%), Positives = 75/123 (60%)
Frame = +1
Query: 475 QASITAFHIKTTFTPVLLGTALKNKGIQPLLDAVLTYLPHPGEVENTALLNESKDGEGQT 654
+A+I + F PV +G+A KNKG+QPLLD VL YLP P EVE+ AL +++K E
Sbjct: 315 KAAIRRATVARKFIPVYMGSAFKNKGVQPLLDGVLDYLPCPMEVESYAL-DQNKSEEKVL 373
Query: 655 IVLDPTRDNKKPFVGLAFKLEVSQFGQLTYLRCYPGC*REVTIYSTPGLTKKVKISRLVR 834
+ P +P V LAFKLE +FGQLTYLR Y G R+ KK+K+ RLVR
Sbjct: 374 LAGTPA----EPLVALAFKLEEGRFGQLTYLRIYDGVIRKGDFIYNVNTGKKIKVPRLVR 429
Query: 835 MHS 843
MHS
Sbjct: 430 MHS 432
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +2
Query: 257 LEKECQGILDLVEEKAIYFDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGE 436
LE+E +G++DLVE KA F+G G++V ++P + + V E+R ELIE +S VD+ L E
Sbjct: 242 LEEEFEGLVDLVELKAYKFEGGSGQNVVASDVPSNMQDLVMEKRRELIEVVSEVDDQLAE 301
Query: 437 LFLEEKTPTVNDLKQALRRSTLKR 508
FL ++ N LK A+RR+T+ R
Sbjct: 302 AFLNDEPIQANQLKAAIRRATVAR 325
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 81.4 bits (192), Expect = 8e-16
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 499 IKTTFTPVLLGTALKNKGIQPLLDAVLTYLPHPGEVENTALLNESKDGEGQTIVLDPTRD 678
I +F PVL G+A KNKG+QPLLDAV+ YLP P ++ + D E ++L+
Sbjct: 300 ISASFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDLPPM----KGTDPEDPELILERKPS 355
Query: 679 NKKPFVGLAFKLEVSQF-GQLTYLRCYPGC*REVTIYSTPGLTKKVKISRLVRMHS 843
+ +PF GLAFK+ F G LT++R Y G + KK +I RL+ MH+
Sbjct: 356 DDEPFSGLAFKIMTDPFVGSLTFVRIYSGKLVAGSYVLNANKDKKERIGRLLEMHA 411
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLC 77
PGHVDFT+EVERALRVLDGAI+ +C
Sbjct: 177 PGHVDFTLEVERALRVLDGAIMSIC 201
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 EKECQGILDLVEEKAIYFDGE-YGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGE 436
E QG++DLV+ KAI + GE G +IP D + + + +++E + +D+ + E
Sbjct: 219 EDNFQGVIDLVKMKAIVWTGEELGAKFSYQDIPADLQEMADDYKAQMMETIVELDDDVME 278
Query: 437 LFLEEKTPTVNDLKQALRRSTL 502
+LE +K+ +R+ T+
Sbjct: 279 TYLEGGEIDEETVKRLIRKGTI 300
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHVDF+ EV R+L GA+LV+ + GVQ+QT+ N+ + INK+D+ A
Sbjct: 142 PGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTIANFYLAFESNLSIIPVINKIDQPTA 201
Query: 183 NPERVLKQMR 212
+P+ V Q++
Sbjct: 202 DPDNVKAQLK 211
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHVDF+ EV R+L +GA+LV+ + GV++QTL ++ + +NK+D GA
Sbjct: 151 PGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGA 210
Query: 183 NPERVLKQM 209
P+RV +++
Sbjct: 211 EPDRVAQEI 219
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/72 (40%), Positives = 39/72 (54%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGH F+ R V D +LV+ + GV QTL K NVP + +NK D+ GA
Sbjct: 253 PGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAVNKCDKSGA 312
Query: 183 NPERVLKQMRSK 218
+PERV Q+ S+
Sbjct: 313 DPERVRIQLGSE 324
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
PGH+DF+ EV ALR+ DGA++V+ + GV QT TV RQ + + +NK+DR
Sbjct: 106 PGHIDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDR 162
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
PGHVDF+ EV ALR+ DGA++V+ + GV QT TV RQ + + +NK+DR
Sbjct: 106 PGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 162
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
PGHVDF+ EV ALR+ DGA++V+ + GV QT TV RQ + + +NK+DR
Sbjct: 106 PGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 162
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
PGHVDF+ EV ALR+ DGA++V+ + GV QT TV RQ + + +NK+DR
Sbjct: 106 PGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 162
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHV+F+ E+ ALR+ DGA+LV+ + GV T R + +P + INK+DRL
Sbjct: 227 PGHVNFSDEMTAALRIADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLIT 286
Query: 183 NPERVLKQMRSKLKHNAAFIH 245
+ KL+H I+
Sbjct: 287 ELKLPPNDAYFKLRHTLEAIN 307
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGH DF EVER L +++G +LV+ SV G QT V ++ + + +NK+DR A
Sbjct: 190 PGHSDFGGEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPTA 249
Query: 183 NPERVL 200
PE V+
Sbjct: 250 RPEFVV 255
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQ--MKRYNVPCLAFINKLDRL 176
PGH+DF EV A R+ D A++++ +V GV QT RQ ++R PCL +NKLDRL
Sbjct: 83 PGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTHAALRQAFLERLR-PCLV-LNKLDRL 140
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQ--MKRYNVPCLAFINKLDRL 176
PGH+DF EV A R+ D A++++ + GV+ QT RQ ++R PCL +NK+DRL
Sbjct: 95 PGHIDFCSEVSAAARLADSALVLVDAAEGVRVQTHAALRQAFVERLR-PCLV-LNKVDRL 152
Query: 177 GANPERVLKQMRSKLKHNAAFIHLPIA*KKSVKEFWTL 290
A + ++L+ + ++ + +S F TL
Sbjct: 153 VAELRLTPAEAHARLRRIVSEVNSIYSALRSRSYFSTL 190
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGH DF EVER + +++GA+LV+ + G +QT V + +Y + + +NK+DR
Sbjct: 131 PGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLSKALKYGLRPILLLNKVDRPSV 190
Query: 183 NPE 191
+ E
Sbjct: 191 SEE 193
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGH F+ R + D AILV+ + G+Q+QT+ +KR+ + +NK+DRL
Sbjct: 493 PGHQSFSNLRTRGSSLCDIAILVVDIMRGIQAQTIESLNILKRHKADFIIVLNKVDRL 550
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGH F+ R + + D A++V+ + G++ QT+ +K NV + +NK+DRL
Sbjct: 511 PGHESFSNMRSRGMSLCDIAVVVVDIMHGLEKQTVETLALLKDRNVRFIVVLNKVDRL 568
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCL-AFINKLDRLG 179
PGH D+ + +DG ILV+ + G QT ++ VP L F+NK+D +
Sbjct: 138 PGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVD 197
Query: 180 ANPERVLKQMRSKLKHNAAFIHLP 251
+PE +L+ + +L+ +F P
Sbjct: 198 -DPE-LLELVEMELRELLSFYKFP 219
>02_04_0462 + 23131433-23132836
Length = 467
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVP-CLAFINKLDRL 176
PGH D+ + +DGAILV+ G QT K+ VP + F+NK D++
Sbjct: 141 PGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPKIVVFLNKKDQV 199
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGH F+ R + D AILV+ + G++ QT+ +K + + +NK+DRL
Sbjct: 770 PGHESFSNLRSRGSSLCDIAILVVDIMHGLEPQTIESLNLLKSRDAVFIVALNKVDRL 827
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 27 EVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
+V+ AL ++DGA++V+ S GV T T R+ + + +NK+DR
Sbjct: 300 DVQPALCIMDGALVVVDSFEGVTLWTKTSIREALNMKIQPVFTLNKIDR 348
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGH F R+ D AILV+ + G+Q QTL +K++ + + +NK+D +
Sbjct: 421 PGHETFRNFRCIGSRLCDIAILVVDVILGLQMQTLESLDLLKKHKIDFIIALNKVDNI 478
>05_03_0513 + 14919136-14920881
Length = 581
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 550 GIQPLLDAVLTYLPHPGEVENTALLNESKDGEGQTIVLDPTRDNKKPFVGLAFKLEVSQF 729
G+ PL+ + + P P + E+ L+N S G G ++ P + ++ FV A + V +F
Sbjct: 239 GVSPLVVDKVQFSPLPKQEEDDELINTS-GGGGFSLQSPPAKQQEEEFVRDASPVAVDKF 297
Query: 730 GQ 735
Q
Sbjct: 298 PQ 299
>06_01_1112 - 9157776-9158149,9158248-9161158
Length = 1094
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 319 TIKIYSFLLNKVQNSLTLFF*AIGRCINAALCFNFERICFSTLSGLAPNLSSLL 158
++K S N +Q + F + CIN + + + +L G NLSSLL
Sbjct: 418 SLKQLSIAQNNLQGDIGYFLSILSNCINLSTLYIYSNHFTGSLPGSVGNLSSLL 471
>04_04_0566 +
26273708-26273805,26274855-26274983,26275581-26275685,
26275794-26275869,26276437-26276511,26276638-26276740,
26276879-26277008,26277266-26277363,26277920-26277996,
26278262-26278375,26278984-26279103,26279533-26279661,
26279946-26280024,26280757-26280875
Length = 483
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 301 FLLNKVQNSLTLFF*AIGRCINAALCFNFERICFSTLSGLAP--NLSSLLINARHGTLYR 128
F+L+K+ ++++ F + F F CF +L G P ++ LL+ A +
Sbjct: 321 FILDKIDSTISNAFKLLSGATFLGAIFCFGAFCFKSLYGFIPFFSVGELLVFATQAPV-N 379
Query: 127 FICLLTVK 104
++CL VK
Sbjct: 380 YVCLHCVK 387
>07_03_0897 - 22389116-22389600,22389611-22389728
Length = 200
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 638 SLLSFNKAVFSTSPGCGRYVSTASSKG*IPLFFRAVPRSTGVNVVLM--WNAVM 483
SLLS + + F+ C Y S+++++G +PL + PR VV + W++ +
Sbjct: 74 SLLSSSSSPFAHQQPCRPYWSSSAAQGLLPLLRASPPRFPAATVVALGWWSSYL 127
>10_08_0393 +
17517511-17517777,17518913-17518987,17519080-17519133,
17519235-17519300,17519383-17519441,17520143-17520177,
17520527-17520616,17520684-17520730,17520817-17520917,
17521259-17521323,17521819-17522135,17522418-17522481,
17522565-17522740,17523386-17523487,17523704-17523847,
17523937-17524032,17524357-17524458,17524740-17524835
Length = 651
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 597 WMR*ICEHSIQ*GLNSLIL*SCTQKHWSECRFNVERRNACLRSLTVGVFSSRNNSPNVS 421
W+R + E +++ + +C+ + W F + RR+ + S+ VFSS +N P S
Sbjct: 144 WIRCLMESALKSPRKDEHIVACSHRRWQA--FRLSRRSNRMHSIDWTVFSSVHNDPMAS 200
>01_05_0737 - 24780952-24781100,24781515-24783453
Length = 695
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 256 AIGRCINAALCFNFERICFSTLSGLAP 176
A GRC A ++F ICF L+G P
Sbjct: 421 AAGRCTEKADVYSFAMICFELLTGKVP 447
>08_02_1581 -
28004060-28004449,28004730-28004888,28004933-28005044,
28005160-28005236,28005525-28006076
Length = 429
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 326 GEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLEEKTPTVNDLKQALRRS 496
GE R + + + TE+ E + + ++ +G+ +E +NDL+QAL +S
Sbjct: 154 GESEREENMSSNSATEISTTGRESDQGVDSLTSVVGKT-MENMQNEINDLRQALHKS 209
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 264 KSVKEFWTLLRRKLYILMVNMASMCGSMRFHKIVEPKLRKGDM 392
+S K +LRR + +V + + C FH +V P +R G +
Sbjct: 757 RSFKRECEVLRRTRHRNLVRVVTTCSQPDFHALVLPLMRNGSL 799
>01_01_0802 +
6246267-6247541,6247625-6247682,6247806-6248129,
6248321-6248355
Length = 563
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 320 EYGEHVRLDEIPQDRRTEVKERRH 391
E EH RLDE+ QD+ V+E H
Sbjct: 404 EKTEHARLDEVEQDQMPPVQETLH 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,630,272
Number of Sequences: 37544
Number of extensions: 467203
Number of successful extensions: 1173
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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