Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021034
(844 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.18
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 25 2.2
AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1... 25 2.9
AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1... 25 2.9
AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1... 25 2.9
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 25 2.9
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 2.9
AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant r... 25 2.9
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 2.9
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 24 5.0
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 24 6.7
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.1 bits (62), Expect = 0.18
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 347 EIPQDRRTEVKERRHELIEHLSNVDETLGELFLEEKTPTVNDLKQ 481
E+ QD T KER HEL L NV E LG+ +++ KQ
Sbjct: 468 ELSQDVGTS-KERIHELQSELDNVREQLGDAKIDKHEDARRKKKQ 511
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 25.4 bits (53), Expect = 2.2
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 723 PIWSTHILEVLSRVLKRGDHIFNARTYKKGKNITFSPHAL 842
P W+ L+ L RV + + R ++ ++I F H+L
Sbjct: 404 PPWADRTLKRLKRVKRAAYRHYQTRRCQRSRSIYFDTHSL 443
>AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 25.0 bits (52), Expect = 2.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 427 CFIYI*KMFNQFMSPFLNFGSTILWNLIEPHMLAIFTI 314
C +Y K +F SP L S + W +I +AIFTI
Sbjct: 79 CTLYHPKQREEF-SPVLRSMSGVFWLMIFLMFVAIFTI 115
>AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 25.0 bits (52), Expect = 2.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 427 CFIYI*KMFNQFMSPFLNFGSTILWNLIEPHMLAIFTI 314
C +Y K +F SP L S + W +I +AIFTI
Sbjct: 79 CTLYHPKQREEF-SPVLRSMSGVFWLMIFLMFVAIFTI 115
>AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 25.0 bits (52), Expect = 2.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 427 CFIYI*KMFNQFMSPFLNFGSTILWNLIEPHMLAIFTI 314
C +Y K +F SP L S + W +I +AIFTI
Sbjct: 79 CTLYHPKQREEF-SPVLRSMSGVFWLMIFLMFVAIFTI 115
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 83 RWCSEPNFNSQQTNETV*CTMSCIYQ*TGQIRS*SRKSTE 202
R C E + Q N TV C C Y+ G + + +T+
Sbjct: 43 RVCHEQHATPQMDNGTVMCIHQCYYKAIGMFAADGKVNTD 82
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 25.0 bits (52), Expect = 2.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 80 CRWCSEPNF 106
CRWC+ PNF
Sbjct: 51 CRWCTMPNF 59
>AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant
receptor Or1 protein.
Length = 417
Score = 25.0 bits (52), Expect = 2.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 427 CFIYI*KMFNQFMSPFLNFGSTILWNLIEPHMLAIFTI 314
C +Y K +F SP L S + W +I +AIFTI
Sbjct: 113 CTLYHPKQREEF-SPVLQSMSGVFWLMIFLMFVAIFTI 149
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -2
Query: 522 HWS-ECRFNVERRNACLRSLTVG 457
HW+ +CR +R+N C+R VG
Sbjct: 670 HWAHDCRSPDDRQNMCIRCGVVG 692
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 24.2 bits (50), Expect = 5.0
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 510 CRFNV-ERRNACLRSLTVGVFSSRNNSPNVSSTFERCS 400
CR + ERR C R G ++R + + SS RC+
Sbjct: 203 CRLRLLERRRQCYRCYEYGHTAARCHGKDRSSKCHRCA 240
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 23.8 bits (49), Expect = 6.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 147 LAFINKLDRLGANPERVLKQMRSKLKHNAAFIH 245
LAFI LDRL N R+ + + K+ N H
Sbjct: 775 LAFIVALDRLVENYPRLARSVLFKVYQNTGDAH 807
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 922,669
Number of Sequences: 2352
Number of extensions: 18769
Number of successful extensions: 41
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -