Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021034
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 138 6e-33
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 84 1e-16
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 58 8e-09
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 57 1e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 55 6e-08
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 43 2e-04
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 36 0.036
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 36 0.036
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 35 0.063
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 34 0.15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 34 0.15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 34 0.15
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 32 0.44
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 30 2.4
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 30 2.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 30 2.4
U41533-12|AAA83173.1| 521|Caenorhabditis elegans Hypothetical p... 30 2.4
Z98877-1|CAB11569.2| 343|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC084155-6|AAK84607.1| 609|Caenorhabditis elegans Hypothetical ... 28 7.2
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 138 bits (333), Expect = 6e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHVDFTVEVERALRVLDGA+LVLC VGGVQSQT TVNRQ+ RYNVP + F+NK+DR GA
Sbjct: 120 PGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFICFVNKMDRNGA 179
Query: 183 NPERVLKQMRSKLKHNAAFIHLPI 254
P + L +R+KL HNAA IHLPI
Sbjct: 180 TPLKALDGLRNKLNHNAALIHLPI 203
Score = 118 bits (283), Expect = 7e-27
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Frame = +1
Query: 499 IKTTFTPVLLGTALKNKGIQPLLDAVLTYLPHPGEVENTALLNESKDGEGQTIVLDPTRD 678
+K F PVL G+ALKNKG+Q ++++V+ YLP P EV N A + G+ + I+L P R+
Sbjct: 286 VKRAFVPVLSGSALKNKGVQTMINSVVKYLPDPSEVVNRATVKTETTGDEKGIILSPKRN 345
Query: 679 NKKPFVGLAFKLEVSQFGQLTYLRCYPG-C*REVTIYSTPGLTKKVKISRLVRMHS 843
N KPFVGLAFKLE ++GQLTY R Y G + T+Y++ +KV++ RLVRMH+
Sbjct: 346 NDKPFVGLAFKLEAGKYGQLTYFRVYQGQLSKGDTVYASRD-GRKVRVQRLVRMHA 400
Score = 101 bits (242), Expect = 6e-22
Identities = 45/78 (57%), Positives = 62/78 (79%)
Frame = +2
Query: 275 GILDLVEEKAIYFDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLEEK 454
GI+DLVE A+Y++GE G VR DEIP+D R E ++RR ELIEH++NVDETLGE+FL ++
Sbjct: 211 GIVDLVEGHALYYEGEGGLIVRKDEIPKDLRVEAEDRRQELIEHIANVDETLGEMFLNDQ 270
Query: 455 TPTVNDLKQALRRSTLKR 508
TP V + +A+RR+ +KR
Sbjct: 271 TPNVQQIHEAIRRTVVKR 288
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHVDF VEVER +RVLDG ++V+ GVQ QTLTV RQ ++ +P FINK+D+L A
Sbjct: 98 PGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSSKFKLPAHFFINKMDKLAA 157
Query: 183 NPERVLKQMRSKLKHNAAFIHLPI 254
N E + + KL A + +P+
Sbjct: 158 NFENSVDSVEQKLGVRAVKLVVPL 181
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 58.0 bits (134), Expect = 8e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
PGHVDF+ EV ALRV DGA++V+ V GV QT TV RQ + + F+NK+DR
Sbjct: 118 PGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDR 174
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGHVDF+ EV R+L V DG +L++ + GVQ+QT+ N+ + INK+D GA
Sbjct: 110 PGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQIIPVINKIDLPGA 169
Query: 183 NPERVLKQMRSKLKHN 230
+ + V Q+++ + N
Sbjct: 170 DIKSVETQLKNLFEFN 185
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
PGHVDF+ EV AL V DGA++V+ V GV QT TV RQ + + F+NK+DR
Sbjct: 118 PGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDR 174
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGHVDF+ EV AL + D A+L++ + G+ SQT + RQ+ R + INK+DRL
Sbjct: 91 PGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAMILVINKIDRL 148
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGHVDF+ EV AL + D A+L++ + G+ SQT + RQ+ R + INK+DRL
Sbjct: 91 PGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAMILVINKIDRL 148
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
PGH F R + D +LV+ + GV+ QT + K NV + +NK+D+ A
Sbjct: 212 PGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQLVVAVNKIDKPNA 271
Query: 183 NPERVLKQMRSKLKHN 230
+P ++ MRS L+H+
Sbjct: 272 DP---MRAMRSLLEHD 284
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGHV+F+ E+ + R+ DG ++++ + GV T R + + I+K+DRL
Sbjct: 209 PGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHAIQERLAVTLCISKIDRL 266
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGHV+F+ E+ + R+ DG ++++ + GV T R + + I+K+DRL
Sbjct: 84 PGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHAIQERLAVTLCISKIDRL 141
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
PGH F+ R + D AILV+ + G++ QT+ + + + P + +NK+DRL
Sbjct: 557 PGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLKLLIKGKTPFVIALNKIDRL 614
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVP---CLAFINKLDR 173
PGH D+ + ++GAILV+ + G QT ++ VP + F+NK+D
Sbjct: 120 PGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVGVPLDNIVVFMNKVDE 179
Query: 174 LGANPERVLKQM 209
+ R L +M
Sbjct: 180 VPDAETRELVEM 191
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVP---CLAFINKLDR 173
PGH D+ + ++GAILV+ + G QT ++ VP + F+NK+D
Sbjct: 121 PGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVGVPLDNIVVFMNKVDE 180
Query: 174 LGANPERVLKQM 209
+ R L +M
Sbjct: 181 VPDAETRELVEM 192
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVP---CLAFINKLDR 173
PGH D+ + ++GAILV+ + G QT ++ VP + F+NK+D
Sbjct: 121 PGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVGVPLDNIVVFMNKVDE 180
Query: 174 LGANPERVLKQM 209
+ R L +M
Sbjct: 181 VPDAETRELVEM 192
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 311 FDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLE 448
FD + +LDEIP T +ERR EL+ + D+ + E E
Sbjct: 5 FDSDSDSESQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISE 50
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 311 FDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLE 448
FD + +LDEIP T +ERR EL+ + D+ + E E
Sbjct: 5 FDSDSDSESQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISE 50
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 329 EHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLE 448
E +LDEIP T +ERR EL+ + D+ + E E
Sbjct: 550 EESQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISE 589
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 329 EHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLE 448
E +LDEIP T +ERR EL+ + D+ + E E
Sbjct: 550 EESQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISE 589
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 329 EHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLE 448
E +LDEIP T +ERR EL+ + D+ + E E
Sbjct: 550 EESQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISE 589
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 329 EHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGELFLE 448
E +LDEIP T +ERR EL+ + D+ + E E
Sbjct: 550 EESQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISE 589
>U41533-12|AAA83173.1| 521|Caenorhabditis elegans Hypothetical
protein R05F9.11 protein.
Length = 521
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 257 LEKECQGILDLVEEKAIYFDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETL 430
+EK + I D EK FD + E +D + D E E+ ++ E+ NV+ET+
Sbjct: 212 IEKNLKAIEDSAIEKV--FDVDQDEQSSVDALSSDGDDEETEKDPDIAENDDNVEETI 267
>Z98877-1|CAB11569.2| 343|Caenorhabditis elegans Hypothetical
protein Y69H2.1 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 816 FYLFCKSWR*IYGHLSSTPWITPQVCELTKLAHFQLECQTNKWFLIIPSRIQHYGLAF 643
FYL +W+ +Y P P V + L HF L C + + +P I H L F
Sbjct: 97 FYLL-STWQTMYLLFGKAPEY-PSVLHCSLLRHFVLACFQSAGLITVPIAIDHICLVF 152
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 534 CTQKHWSECRFNVERRNACLRSLTVGVFSSRNN 436
C QK ECRF CLRS V + + N
Sbjct: 383 CCQKKECECRFECPPTCKCLRSADVSIVRTSQN 415
>AC084155-6|AAK84607.1| 609|Caenorhabditis elegans Hypothetical
protein Y45G5AM.8 protein.
Length = 609
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 257 LEKECQ-GILDLVEEKAIYFDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLG 433
L K C + DL + K FD G H D +D E + RR E L +D +
Sbjct: 392 LRKGCNTDMWDLFKVKTRKFDSTIGRHDVSDTEDEDEEAERRNRREAERELLETIDLSQM 451
Query: 434 ELF---LEEKTP 460
+ L+EK+P
Sbjct: 452 KFMATPLKEKSP 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,024,484
Number of Sequences: 27780
Number of extensions: 437592
Number of successful extensions: 1230
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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