Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021032
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5DG95 Cluster: SJCHGC09067 protein; n=1; Schistosoma j...    35   2.5  
UniRef50_Q4SLQ6 Cluster: Chromosome 15 SCAF14556, whole genome s...    34   4.4  

>UniRef50_Q5DG95 Cluster: SJCHGC09067 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09067 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 162

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 29/87 (33%), Positives = 41/87 (47%)
 Frame = -3

Query: 579 KKKRLPQIARRYNHQQPNTDVNKLKLLNTYSVSLGSCDNLSIMSAIFRVLNSFHNFIAIR 400
           K  RL + A       PN +VN +  LN  +    S +NLS+ +   R+L+    F  +R
Sbjct: 44  KDCRLQEFALNNPVLLPN-NVNGISPLNYSNYRKESLENLSVETGK-RILSKKRRFTELR 101

Query: 399 LPSSYVLTGGRTSNESTRVGTTALPIS 319
           LPSS   TGG  S     + +   PIS
Sbjct: 102 LPSSINRTGGGRSGYRRYLFSPCPPIS 128


>UniRef50_Q4SLQ6 Cluster: Chromosome 15 SCAF14556, whole genome
           shotgun sequence; n=2; Percomorpha|Rep: Chromosome 15
           SCAF14556, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 530

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -3

Query: 546 YNHQQPNTDVNKLKLLNT--YSVSLGSCDNLSIMSAIFRVLNSFHNFIAIRLPSSYVL 379
           YNH       ++L L+ T  YS+SLGS     ++   FR L+   N+I + L  SY+L
Sbjct: 152 YNHSHEKEVFHRLYLIYTVGYSISLGSLIVAVLILGYFRRLHCTRNYIHMHLFVSYML 209


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,662,241
Number of Sequences: 1657284
Number of extensions: 11663781
Number of successful extensions: 21973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21967
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)