Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021032
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   8.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   8.1  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 429 NSFHNFIAIRLPSSYVLTGGRTSNEST 349
           NSFH F +     + V   G  SN S+
Sbjct: 478 NSFHQFYSSESSQNQVAPTGENSNSSS 504


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 145 LLFKPFKMISRGEMLFGLSDIS*ILPKSH 59
           +L  PFK+    +ML G   I  +LP  H
Sbjct: 101 ILTTPFKLPYFWKMLTGFGKIEQVLPPHH 129


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +1

Query: 145 VTTIHIKTLDYRLIIYLSVLLKMW 216
           V  + +  + +RL+ +L++L+K W
Sbjct: 643 VVMLAVLIVGFRLVAFLALLVKTW 666


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +1

Query: 145 VTTIHIKTLDYRLIIYLSVLLKMW 216
           V  + +  + +RL+ +L++L+K W
Sbjct: 643 VVMLAVLIVGFRLVAFLALLVKTW 666


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 429 NSFHNFIAIRLPSSYVLTGGRTSNEST 349
           NSFH F +     + V   G  SN S+
Sbjct: 426 NSFHQFYSSESSQNQVAPTGENSNSSS 452


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 549 RYNHQQPNTDVNKLKLLNTYSVSLGSCDNLSIMSAI 442
           R  H +PN DVN+  L    ++ L +  NL  + AI
Sbjct: 64  RIKHLEPNLDVNQGNLKKFNALKLKN-PNLKTLVAI 98


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 631 FEKIESLCDDVY 596
           F K++S+C+D Y
Sbjct: 62  FAKLDSICEDCY 73


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 631 FEKIESLCDDVY 596
           F K++S+C+D Y
Sbjct: 62  FAKLDSICEDCY 73


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 631 FEKIESLCDDVY 596
           F K++S+C+D Y
Sbjct: 62  FAKLDSICEDCY 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,106
Number of Sequences: 336
Number of extensions: 3152
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)