Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021031
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 144 7e-35
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 6e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 126 1e-29
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 86 3e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 4e-08
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 31 0.97
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.97
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24) 29 3.0
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.0
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.0
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.2
SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 6.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 144 bits (349), Expect = 7e-35
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 688
DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LT
Sbjct: 152 DSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLT 211
Query: 689 IEDGIFEVKSTAGDTH 736
IEDGIFEVKSTAGDTH
Sbjct: 212 IEDGIFEVKSTAGDTH 227
Score = 136 bits (329), Expect = 2e-32
Identities = 63/66 (95%), Positives = 64/66 (96%)
Frame = +1
Query: 58 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 237
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 238 MNPNNT 255
MNP NT
Sbjct: 61 MNPENT 66
Score = 134 bits (324), Expect = 7e-32
Identities = 60/88 (68%), Positives = 71/88 (80%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKXEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ +FDAKRLIGRK +D V DM HWPF V+ G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPAYF 506
VLTKMKETAEAYLG V +AV+TVPAYF
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYF 150
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 141 bits (341), Expect = 6e-34
Identities = 69/76 (90%), Positives = 71/76 (93%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 688
DSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+
Sbjct: 245 DSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLS 304
Query: 689 IEDGIFEVKSTAGDTH 736
IEDGIFEVKST GDTH
Sbjct: 305 IEDGIFEVKSTHGDTH 320
Score = 134 bits (325), Expect = 5e-32
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +1
Query: 58 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 237
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 238 MNPNNT 255
MNP NT
Sbjct: 61 MNPTNT 66
Score = 110 bits (264), Expect = 1e-24
Identities = 63/113 (55%), Positives = 71/113 (62%), Gaps = 25/113 (22%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKXEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEV--- 413
P IFDAKRLIGR+ +D V+ DMKHW FEVV+ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 414 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYF 506
SSMVL KMKETAEAYLG V +AV+TVPAYF
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 175
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 408 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 506
++SSMVL KMKETAEAYLG V +AV+TVPAYF
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 243
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 139 bits (337), Expect = 2e-33
Identities = 67/77 (87%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 688
DSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILT
Sbjct: 152 DSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILT 211
Query: 689 IEDG-IFEVKSTAGDTH 736
I+DG +FEVKSTAGDTH
Sbjct: 212 IDDGSLFEVKSTAGDTH 228
Score = 135 bits (326), Expect = 4e-32
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKXEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ IFDAKRLIGR+ +DATVQ+DMK WPF+++S KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPAYF 506
VL KMKETAEAYLG+ V +AVITVPAYF
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYF 150
Score = 131 bits (317), Expect = 5e-31
Identities = 59/66 (89%), Positives = 63/66 (95%)
Frame = +1
Query: 58 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 237
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 238 MNPNNT 255
+NP NT
Sbjct: 61 LNPENT 66
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 126 bits (305), Expect = 1e-29
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 688
D+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LT
Sbjct: 850 DAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLT 908
Query: 689 IEDGIFEVKSTAGDTH 736
I++G+FEV +T GDTH
Sbjct: 909 IDNGVFEVVATNGDTH 924
Score = 117 bits (282), Expect = 9e-27
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKXEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSM 422
P+ +FDAKRLIGR +D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 423 VLTKMKETAEAYLGKTVQNAVITVPAYFKTLKDKPQK 533
VLTKMKETAEAYLGK V +AV+TVPAYF + + K
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 104 bits (249), Expect = 9e-23
Identities = 48/61 (78%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +1
Query: 76 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 252
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 253 T 255
T
Sbjct: 764 T 764
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +2
Query: 515 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 694
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQ 242
Query: 695 DGIFEVKSTAGD 730
G+F + AG+
Sbjct: 243 GGMFVTMAMAGN 254
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 237
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 238 MNPNNT 255
+NP NT
Sbjct: 90 INPKNT 95
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 243 PQQHIFDAKRLIGRKXEDATVQADMKHWPFEVVSXG-GKPKIKVAYKGEDKTFFPEEVSS 419
P+ I+DAKR IG+ + K + F V + G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 420 MVLTKMKETAEAYLGKTVQNAVITVPAYF 506
V+ K++ AE L TV AV++VPA F
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEF 180
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 KRLIGRKXEDATVQADMKHWPFEVVSXGGKP-KIKVAYKGEDKTFFPEEVSSMVLTKMKE 443
KR IGRK D VQ ++ H P++VV I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 444 TAEAYLGKTVQNAVITVPAYF 506
TAE L V + VI+VP+Y+
Sbjct: 187 TAEIALKTKVTDCVISVPSYY 207
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVS 679
D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVC 268
Query: 680 ILTIEDGIFEVKSTA 724
I G +V STA
Sbjct: 269 ITAFLKGQLKVLSTA 283
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 76 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 231
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +3
Query: 363 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFKTLKDKPQK 533
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+F + + K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 50.4 bits (115), Expect = 1e-06
Identities = 37/69 (53%), Positives = 40/69 (57%), Gaps = 26/69 (37%)
Frame = +2
Query: 509 DSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDK 616
D+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLDK
Sbjct: 51 DAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDK 110
Query: 617 K--GTGERN 637
G ERN
Sbjct: 111 ARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +2
Query: 638 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 736
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTY 34
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 127 GKVEIIANDQGNRTTPSYVAFTDTERLI 210
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 512 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVS 679
++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +
Sbjct: 119 AERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVAT 178
Query: 680 IL 685
I+
Sbjct: 179 IV 180
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 357 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 506
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +F
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFF 116
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 457 ISAKLCRMQS-SRFPRTSRLSKTSHKR-CRYHLRLERSPNH 573
+SAKLC + + S+ R + HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 136 EIIANDQGNRTTPSYVAFT-DTERL 207
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 638 VLIFDLGGGTFDVSILTIEDGIFEVK 715
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 457 ISAKLCRMQS-SRFPRTSRLSKTSHKR-CRYHLRLERSPNH 573
+SAKLC + + S+ R + HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 644 IFDLGGGTFDVSILTIEDGIFEV 712
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
Length = 1497
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 424 CLRK*RKLPKLISAKLCRMQSSRFPRTSRLSKTSHKRCRYHLRLERSPNH 573
C K R L +++ L Q+ + T++L H R R R R+PNH
Sbjct: 1205 CQHKWRNLKEVLVTSLPERQTGQRNLTNKLLMNLHVRLRRWRRESRAPNH 1254
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 735 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 619
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 244 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 146
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 651 TSAAVPSTCPSLPSRMVSSR*NPPPATP 734
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 587 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 736
A A L +G E + D G GT VS + +E+G +++ D H
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEH 1554
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 4 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 90
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 376 IRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQSSRFPRTSRLSKTSHKRCRYHLRL 555
+ +K FS + C K L +++ L Q+ + T++L H R R R
Sbjct: 676 VHLKVCHFSSQVVDTACQHKWSNLKEVLVPSLPERQTGKRKLTNKLLMNLHVRLRRWRRE 735
Query: 556 ERSPNH 573
R+PNH
Sbjct: 736 SRAPNH 741
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 712 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 581
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,896,564
Number of Sequences: 59808
Number of extensions: 552673
Number of successful extensions: 1901
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1890
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -