Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021030
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    30   0.089
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   4.4  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   5.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   5.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   5.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 29.9 bits (64), Expect = 0.089
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -2

Query: 415 WPPSSANPRQLCLVASRNLHVGGRIDASLSTSPLEAYKLKAYSSRPHPATCRGTVQLYDR 236
           W P  A  R+LC  AS N H   R+D     +  E ++ +   S    A   G  QL+ +
Sbjct: 311 WTPERAQLRELCKEASDNAH--SRVDPDERAAASEIHQER--RSELKRAITTGKGQLFQQ 366

Query: 235 SFQELN 218
              E+N
Sbjct: 367 QIDEVN 372


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 280 PHPATCRGTVQLYDRSFQELNRRE 209
           P+P  CR TV   ++  QE+  RE
Sbjct: 335 PYPHPCRPTVDEKNKQLQEVEMRE 358


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 7    YRSYNDENKSASHAEP*SGLKGCIHTD--RRVRYWSDRKIVLQNKGVQ 144
            YR  N  ++    A P +  +     D  RRV  W +R+ +++N G+Q
Sbjct: 1122 YRQRNRRSQPTPPAPPPTPREAARLEDGRRRVARWRERQRMIRNGGIQ 1169


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 568 CSTEPGLRGSCRGDSPG 618
           C T P   G+C GDS G
Sbjct: 211 CFTSPVNNGACNGDSGG 227


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 504 DHADAVDGPEGETGRAR 554
           DH D +DGP G  G +R
Sbjct: 457 DHPDNIDGPGGGGGGSR 473


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 504 DHADAVDGPEGETGRAR 554
           DH D +DGP G  G +R
Sbjct: 433 DHPDNIDGPGGGGGGSR 449


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,868
Number of Sequences: 2352
Number of extensions: 16184
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)