Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021026
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0885 - 21290394-21291347 40 0.002
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 37 0.015
06_03_1478 - 30420097-30420651 35 0.081
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 34 0.11
11_08_0067 - 28135216-28135728 34 0.14
05_01_0111 - 752045-752641 34 0.14
01_06_1614 - 38648495-38649706 33 0.25
11_08_0066 - 28131521-28132012 33 0.33
07_03_1151 + 24385272-24386543 31 1.0
05_04_0438 + 21244735-21244782,21245089-21245274,21245307-212453... 29 3.1
01_01_0210 - 1801335-1802138 29 3.1
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 29 4.0
08_02_0934 + 22747742-22748644 29 4.0
03_02_0164 - 6066744-6067637 29 4.0
02_05_0202 + 26708049-26709074 29 4.0
09_01_0106 + 1673737-1674522,1674625-1675089 29 5.3
02_05_0925 - 32768815-32769654 29 5.3
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 29 5.3
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 28 7.1
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 28 7.1
08_01_0025 - 184899-185384,185707-185940,187156-187341,188108-18... 28 7.1
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 7.1
04_01_0317 + 4268418-4269446 28 7.1
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 7.1
02_05_0201 + 26687369-26689228 28 7.1
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 28 7.1
01_06_1495 + 37769982-37771496 28 7.1
01_01_0990 + 7847066-7847478,7847713-7848679 28 7.1
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 28 9.3
07_03_1165 - 24459156-24460139 28 9.3
06_03_0335 + 19662933-19663334,19663358-19664023 28 9.3
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 28 9.3
02_05_1277 - 35408097-35409080 28 9.3
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 28 9.3
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 28 9.3
01_05_0095 + 18069688-18070416 28 9.3
>10_08_0885 - 21290394-21291347
Length = 317
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 604 KPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMHDPQ-KARPIELPVNSKDG 762
+P ++A AP +EC C VF + ++L HKR H P ARP P +K G
Sbjct: 231 RPAPASSAAAPAIHECPFCFRVFDSGQALGGHKRAHMPSGGARPSPSPSPAKCG 284
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 589 HMKIHKPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMHDPQK 723
HM + DN P +C++C VFST+ SL+ H MH +K
Sbjct: 160 HMPLLSSCDDNLLLLPPETQCQMCSKVFSTSGSLREHMMMHGGEK 204
>06_03_1478 - 30420097-30420651
Length = 184
Score = 34.7 bits (76), Expect = 0.081
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 16/80 (20%)
Frame = +1
Query: 532 KYACPHCSAVYENSKSLHAHMKIH---------KPKQDNNAEAPLT-------YECELCC 663
+Y CP C + K++H HM+ H P++ + + L Y C+ C
Sbjct: 55 RYPCPLCDRHFPTEKAVHGHMRSHPGRGWRGMEPPREPSPGDLALAADGKRYRYVCDRCK 114
Query: 664 TVFSTNKSLKLHKRMHDPQK 723
F T ++L H+ H +K
Sbjct: 115 APFETRQALGGHRASHSTKK 134
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 99 IQEPIDEVENKLTYDPMQTEDENGQDKQISRRVITETGDILEAPLLTNSNPL 254
I EPID K+ DP+ T+ E K IS + T+T +I+ P+ T S L
Sbjct: 439 ISEPIDTQTEKIISDPIDTQSE----KIISEPIDTQTEEIISDPIDTQSEML 486
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 99 IQEPIDEVENKLTYDPMQTEDENGQDKQISRRVITETGDILEAPLLTNSNPL 254
I EPID K+ DP++ + E K IS + +T I+ P+ S +
Sbjct: 391 ISEPIDTQTEKIISDPIEAQSE----KIISEPIDAQTEKIISEPIEAQSEKI 438
>11_08_0067 - 28135216-28135728
Length = 170
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 625 AEAPLTYECELCCTVFSTNKSLKLHKRMHDPQKAR 729
A P+ + C++C VF+T ++L H R H P +R
Sbjct: 93 ASTPVVHRCDMCGKVFATGQALGGHMRRHRPLVSR 127
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTY 645
+ C C V+ ++L HM+ H+P N T+
Sbjct: 99 HRCDMCGKVFATGQALGGHMRRHRPLVSRNGTMSTTW 135
>05_01_0111 - 752045-752641
Length = 198
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKIH-KPKQDNNAE----APLTYECELCCTVFSTNKSLKLH 699
+ C C+ V+ + ++L H H KP+ D + + P + C +C F+ ++L H
Sbjct: 51 FVCKTCNRVFPSFQALGGHRASHKKPRLDGDGDLSLSKPKLHGCSICGLEFAIGQALGGH 110
Query: 700 KRMH 711
R H
Sbjct: 111 MRRH 114
>01_06_1614 - 38648495-38649706
Length = 403
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 517 PCKILKYACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPL 639
P + + C CS + + K++H HM++H+ +D E L
Sbjct: 99 PVARVAFPCHVCSKEFGSRKAVHGHMRVHQADKDKEKEPSL 139
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Frame = +1
Query: 535 YAC--PHCSAVYENSKSLHAHMK--IHKPKQ-------DNNAEAPLTYECELCCTVFSTN 681
Y C P C Y + L H+ I++ KQ + A + C+ C FST
Sbjct: 245 YRCSYPGCKGEYRTHQGLGGHVAGHINREKQAAAAAQGGSGARPEGNHPCKTCGKEFSTG 304
Query: 682 KSLKLHKRMH-DPQKAR 729
+L H R H DP+K +
Sbjct: 305 VALGGHMRKHYDPKKKK 321
>11_08_0066 - 28131521-28132012
Length = 163
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKIH-KP---KQDNNAEAPLTYECELCCTVFSTNKSLKLHK 702
+ C C + + ++L H H +P K+ PL + CE+C F ++L H
Sbjct: 71 FECRTCGRRFPSHQALGGHRTSHLRPTTNKRRPGPSKPLIHACEVCGLGFQMGQALGGHM 130
Query: 703 RMHDPQ 720
R H P+
Sbjct: 131 RRHRPR 136
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 517 PCKILKYACPHCSAVYENSKSLHAHMKIHKPK 612
P K L +AC C ++ ++L HM+ H+P+
Sbjct: 105 PSKPLIHACEVCGLGFQMGQALGGHMRRHRPR 136
>07_03_1151 + 24385272-24386543
Length = 423
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 493 KYQ*LQSKPCKILKYACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAP 636
K Q + P K +Y CP C V+ + ++L H HK + + + AP
Sbjct: 280 KQQPRAAAPAKRTRYECPGCGKVFASYQALGGHRASHK-RINTSCSAP 326
>05_04_0438 +
21244735-21244782,21245089-21245274,21245307-21245384,
21245385-21245678,21246137-21246262,21246935-21247168,
21247534-21248061
Length = 497
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 419 VKAIKLQNGDLAKMYYCKSCMIYVP 493
VK I + NG L K+ YC +CMIY P
Sbjct: 150 VKEIMV-NGMLVKVKYCDTCMIYRP 173
>01_01_0210 - 1801335-1802138
Length = 267
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 532 KYACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPL 639
+Y C +C + NS++L H HK ++ A L
Sbjct: 69 RYECQYCCREFANSQALGGHQNAHKKERQQLKRAQL 104
Score = 29.5 bits (63), Expect = 3.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHDPQK 723
YEC+ CC F+ +++L H+ H ++
Sbjct: 70 YECQYCCREFANSQALGGHQNAHKKER 96
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 434 LQNGDLAKMYYCKSCMIYVP 493
L NG L K+ YC +CM+Y P
Sbjct: 151 LVNGVLVKVKYCHTCMLYRP 170
>08_02_0934 + 22747742-22748644
Length = 300
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHDPQKAR 729
+EC CC F T+++L H+ H ++ R
Sbjct: 99 FECHYCCRNFPTSQALGGHQNAHKRERQR 127
>03_02_0164 - 6066744-6067637
Length = 297
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 625 AEAPLTYECELCCTVFSTNKSLKLHKRMH--DPQKARPIEL 741
A++ +EC CC F T+++L H+ H + Q A+ +++
Sbjct: 95 ADSSRKFECHYCCRHFPTSQALGGHQNAHKRERQHAKRVQM 135
>02_05_0202 + 26708049-26709074
Length = 341
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 610 KQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMH 711
++D + +AP +EC C VF++ ++L HK+ H
Sbjct: 252 EEDMDGKAP-PHECPYCYRVFASGQALGGHKKSH 284
>09_01_0106 + 1673737-1674522,1674625-1675089
Length = 416
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD 714
YEC C T+FS+ ++L H + H+
Sbjct: 309 YECRKCGTMFSSGQALGWHMKSHN 332
>02_05_0925 - 32768815-32769654
Length = 279
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 625 AEAPLTYECELCCTVFSTNKSLKLHKRMHDPQK 723
A A +EC CC F T+++L H+ H ++
Sbjct: 84 AAAERKFECHYCCRNFPTSQALGGHQNAHKRER 116
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD 714
Y CE+C F +++L+LH+R H+
Sbjct: 74 YVCEICGKGFQRDQNLQLHRRGHN 97
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMH 711
Y CE+C F +++L++H+R H
Sbjct: 66 YVCEICNQGFQRDQNLQMHRRRH 88
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMH 711
Y CE+C F +++L++H+R H
Sbjct: 65 YVCEICNQGFQRDQNLQMHRRRH 87
>08_01_0025 -
184899-185384,185707-185940,187156-187341,188108-188158
Length = 318
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 407 HKVVVKAIKLQNGDLAKMYYCKSCMIYVPNINDFN 511
H V+KAIK +A M YC C +V + F+
Sbjct: 115 HHSVIKAIKESPASVAIMAYCFICFWFVGGLTGFH 149
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 28.3 bits (60), Expect = 7.1
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +1
Query: 541 CPHCSAVYENSKSLHAHMKIHKPKQDNNA 627
CP C V+ + K+++ H++ H ++ A
Sbjct: 190 CPECGKVFMSDKAMYGHLRSHPLRKHKGA 218
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 517 PCKILKYACPHCSAVYENSKSLHAHMKIHKPKQDNNAE 630
P KY C C + ++L H+ HK ++ + AE
Sbjct: 457 PASKRKYECSECHKTFSTHQALGGHVAAHKRQKKSCAE 494
>04_01_0317 + 4268418-4269446
Length = 342
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 625 AEAPLTYECELCCTVFSTNKSLKLHKRMHDP 717
++ P +EC +C F++ ++L H R H P
Sbjct: 234 SKQPRVHECSICGAEFASGQALGGHMRRHRP 264
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD-PQKAR 729
+ CE+C F +++L+LH+R H+ P K R
Sbjct: 48 FVCEICNKGFQRDQNLQLHRRGHNLPWKLR 77
>02_05_0201 + 26687369-26689228
Length = 619
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMH 711
+EC +C VF++ ++L HKR H
Sbjct: 432 HECSICHRVFTSGQALGGHKRCH 454
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD-PQKAR 729
+ CE+C F +++L+LH+R H+ P K R
Sbjct: 81 FVCEICGKGFQRDQNLQLHRRGHNLPWKLR 110
>01_06_1495 + 37769982-37771496
Length = 504
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 631 APLTYECELCCTVFSTNKSLKLHKRMHDPQKARPIELPVNSKD 759
AP T+ C +C F + +L++H R H + L SKD
Sbjct: 260 APHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKD 302
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD-PQKAR 729
+ CE+C F +++L+LH+R H+ P K R
Sbjct: 25 FVCEICGKGFQRDQNLQLHRRGHNLPWKLR 54
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD-PQKAR 729
+ CE+C F +++L+LH+R H+ P K R
Sbjct: 39 FVCEVCNKGFQRDQNLQLHRRGHNLPWKLR 68
>07_03_1165 - 24459156-24460139
Length = 327
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 625 AEAPLTYECELCCTVFSTNKSLKLHKRMHDPQKAR-PIELP 744
A ++ C LC F + K++ H R+H + + P+ LP
Sbjct: 107 ARREASFPCHLCNKEFGSRKAVHGHMRVHHAENEKEPMSLP 147
>06_03_0335 + 19662933-19663334,19663358-19664023
Length = 355
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 646 ECELCCTVFSTNKSLKLHKRMHDPQKARPIELP 744
EC +C + L +R+H P ARP+ +P
Sbjct: 121 ECVVCLQELADGDVALLPRRLHRPLAARPLHVP 153
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMH 711
Y CE+C F ++L++H+R H
Sbjct: 31 YVCEICGQGFQREQNLQMHRRRH 53
>02_05_1277 - 35408097-35409080
Length = 327
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHDPQKARP 732
+EC +C F + ++L H R H P A P
Sbjct: 215 HECSICGAEFGSGQALGGHMRRHRPLHAPP 244
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHD 714
Y CE+C F +++L+LH+R H+
Sbjct: 66 YICEVCHKGFQRDQNLQLHRRGHN 89
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 532 KYACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMH 711
K+ C CS Y AH KI K+ Y C+ C T+FS S H+
Sbjct: 141 KWKCDRCSKKYAVQSDWKAHTKICGTKE---------YRCD-CGTIFSRKDSFITHRAFC 190
Query: 712 D 714
D
Sbjct: 191 D 191
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Frame = +1
Query: 526 ILKYACPHCSAVYENSKSLHAHMKIHKPKQ-------DNNAEAPL---TYECELCCTVFS 675
I +Y C C+ V + AHM H ++ +N E + + C+ C F
Sbjct: 11 IRRYKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGEKVVHEGDHTCQECGASFQ 70
Query: 676 TNKSLKLHKRMHDPQKA 726
LK H + H +++
Sbjct: 71 KPAHLKQHMQSHSDERS 87
>01_05_0095 + 18069688-18070416
Length = 242
Score = 27.9 bits (59), Expect = 9.3
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 643 YECELCCTVFSTNKSLKLHKRMHDPQK 723
+EC+ CC F+ +++L H+ H ++
Sbjct: 71 FECQYCCREFANSQALGGHQNAHKKER 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,553,522
Number of Sequences: 37544
Number of extensions: 380292
Number of successful extensions: 1067
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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