Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021025
         (730 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036604-1|AAH36604.2|  521|Homo sapiens D-2-hydroxyglutarate de...   108   2e-23
BC071598-1|AAH71598.1|  307|Homo sapiens D2HGDH protein protein.       86   1e-16
X87248-1|CAA60698.1|  341|Homo sapiens HP8 peptide protein.            32   2.4  

>BC036604-1|AAH36604.2|  521|Homo sapiens D-2-hydroxyglutarate
           dehydrogenase protein.
          Length = 521

 Score =  108 bits (260), Expect = 2e-23
 Identities = 44/73 (60%), Positives = 58/73 (79%)
 Frame = +3

Query: 510 LVGGSVPVFDEFVLCLGLLNKIISLDEISGVLICEAGCILESLDTYVRERNLIMPLDLGA 689
           +VGGSVPVFDE +L    +N+++S   +SG+L+C+AGC+LE L  YV ER+ IMPLDLGA
Sbjct: 135 MVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGA 194

Query: 690 KGTCQIGGNASTN 728
           KG+C IGGN +TN
Sbjct: 195 KGSCHIGGNVATN 207



 Score = 81.8 bits (193), Expect = 2e-15
 Identities = 38/84 (45%), Positives = 60/84 (71%)
 Frame = +1

Query: 256 KYNVKRKQFGTVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRST 435
           +Y V+R  F TV + D+  F+ I+    V+TD   +   N+DW++  RG SKV+L+PR++
Sbjct: 51  RYPVQRLPFSTVSKQDLAAFERIVPGG-VVTDPEALQAPNVDWLRTLRGCSKVLLRPRTS 109

Query: 436 EEVSKIIKYCNDKHLAVCPQGGNT 507
           EEVS I+++C++++LAV PQGGNT
Sbjct: 110 EEVSHILRHCHERNLAVNPQGGNT 133


>BC071598-1|AAH71598.1|  307|Homo sapiens D2HGDH protein protein.
          Length = 307

 Score = 86.2 bits (204), Expect = 1e-16
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +3

Query: 510 LVGGSVPVFDEFVLCLGLLNKIISLDEISGVLICEAGCILESLDTYVRERNLIMPLDLGA 689
           +VGGSVPVFDE +L    +N+++S   +SG      G +LE L  YV ER+ IMPLDLGA
Sbjct: 135 MVGGSVPVFDEIILSTARMNRVLSFHSVSG------GLVLEELSRYVEERDFIMPLDLGA 188

Query: 690 KGTCQIGGNASTN 728
           KG+C IGGN +TN
Sbjct: 189 KGSCHIGGNVATN 201



 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 38/84 (45%), Positives = 60/84 (71%)
 Frame = +1

Query: 256 KYNVKRKQFGTVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRST 435
           +Y V+R  F TV + D+  F+ I+    V+TD   +   N+DW++  RG SKV+L+PR++
Sbjct: 51  RYPVRRLPFSTVSKQDLAAFERIVPGG-VVTDPEALQAPNVDWLRTLRGCSKVLLRPRTS 109

Query: 436 EEVSKIIKYCNDKHLAVCPQGGNT 507
           EEVS I+++C++++LAV PQGGNT
Sbjct: 110 EEVSHILRHCHERNLAVNPQGGNT 133


>X87248-1|CAA60698.1|  341|Homo sapiens HP8 peptide protein.
          Length = 341

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 628 RMHPASQMRTPDISSKLIILFRRPRQRTNSSKTGTEPP--TSQCSRLADKPPNVC 470
           RM P+S  R P  S       RRPR RT + +  T PP   S  SR A +PP  C
Sbjct: 153 RMKPSS-WRWPACSLTSRRRRRRPRTRTRTRRPRTWPPRTCSSRSRTAARPPCTC 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,150,033
Number of Sequences: 237096
Number of extensions: 2032282
Number of successful extensions: 7533
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7520
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)