Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021023
(623 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583... 128 3e-30
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917... 56 2e-08
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 44 1e-04
05_07_0048 + 27321906-27322190,27322897-27323441,27323552-273236... 33 0.24
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 31 0.74
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780... 29 2.3
01_06_1397 - 37017468-37017561,37017763-37017836,37019128-370191... 29 3.0
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 28 5.2
02_04_0107 - 19804730-19805044 28 5.2
01_01_0604 - 4493868-4494028,4494538-4494746,4495860-4496003,449... 28 5.2
02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137,344... 28 6.9
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 27 9.2
09_06_0195 - 21477817-21478119,21478216-21478366,21478459-214786... 27 9.2
05_05_0185 + 23064249-23064448,23064881-23064950,23065082-230651... 27 9.2
01_06_0418 + 29210310-29210612,29211154-29211541,29211946-292121... 27 9.2
>03_02_1035 -
13557425-13557721,13557855-13558058,13558143-13558332,
13558450-13558841,13558931-13559023,13559297-13559500,
13559572-13559635,13559760-13559806,13559825-13559971,
13560243-13560335,13560420-13560599,13560993-13561128,
13561216-13561466,13561556-13561669,13561794-13561991,
13562050-13562110,13562921-13563210
Length = 986
Score = 128 bits (310), Expect = 3e-30
Identities = 60/81 (74%), Positives = 74/81 (91%)
Frame = +1
Query: 259 MEMVSADTELVSTLSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMKVFFV 438
ME++++ T++V L +K+APPLVTLLSAEPE+QYVALRNINL+VQKRP IL HE+KVFF
Sbjct: 356 MELITS-TDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFC 414
Query: 439 KYNDPIYVKLEKLDIMIRLAS 501
KYNDPIYVK+EKL+IMI+LAS
Sbjct: 415 KYNDPIYVKMEKLEIMIKLAS 435
Score = 115 bits (277), Expect = 3e-26
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +2
Query: 2 AALSEINEASVSGRPLVEMNAPTINKLLTALNECTEWGQVFILDALSNYSPRDAREAHSI 181
AAL+EI ++S RP+ E+ + T++KLLTALNECTEWGQVFILD+LS Y DAREA +I
Sbjct: 272 AALAEIQDSST--RPIFEITSHTLSKLLTALNECTEWGQVFILDSLSRYKAADAREAENI 329
Query: 182 CERITPRLAHANAAVVLSAVKVLM 253
ER+TPRL HAN AVVLSAVK+++
Sbjct: 330 VERVTPRLQHANCAVVLSAVKIIL 353
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +3
Query: 507 HIAQVLGELKEYATEVDVDFVRKAVRAIGRCAIKVEPSA 623
+I QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E +A
Sbjct: 438 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 476
>01_05_0762 +
24990915-24990970,24991076-24991592,24991676-24991753,
24993678-24993743,24994819-24994943,24995414-24995612,
24995909-24996137,24996259-24996425,24996526-24996735,
24997245-24997355,24997436-24997612,24997826-24998284,
24998676-24998966
Length = 894
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 65 PTINKLLTALNECTEWGQVFILDALSNYSPRDAREAHSICERITPRLAHANAAVVLSAVK 244
P + LL + E +EW Q +L+ +SN+ P D E I + RL HAN AVVL+ +K
Sbjct: 273 PVVFYLLNRIKEFSEWAQCLVLELVSNFLPSDNNEIFDIMNLLEDRLQHANGAVVLATIK 332
Query: 245 VLM 253
V +
Sbjct: 333 VFL 335
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/84 (27%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 MEMVSADTELVSTLSRKLAPPLVTLLSA-EPEVQYVALRNINLVVQKRPDILKHEMKVFF 435
+ + + T++ + ++ PL+TL+ A PE Y L +++L+V + P + + K F+
Sbjct: 335 LHLTMSMTDVHQQVYERIKAPLLTLVGAGSPEQSYSVLCHLHLLVMRAPMLFSSDYKSFY 394
Query: 436 VKYNDPIYVKLEKLDIMIRLASQA 507
+++DP YVK KL+++ +A+++
Sbjct: 395 CQFSDPSYVKKLKLEMLTAIANES 418
Score = 34.3 bits (75), Expect = 0.080
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 504 SHIAQVLGELKEYATEVDVDFVRKAVRAIGRCAIK 608
S+ +++ EL EYA VDV R+++RA+G+ A++
Sbjct: 418 SNTYEIVTELCEYAGNVDVPIARESIRAVGKIALQ 452
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 289 VSTLSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMKVFFVKYNDPIYVKL 468
V L+R + P L TL S+ P+ YV L NI + + P + + FF+ +DP K
Sbjct: 343 VDQLNRVVGPILFTLRSS-PDATYVMLGNILVFAKTAPQLFAPFYEDFFICTSDPYQTKA 401
Query: 469 EKLDIMIRLASQAT*P 516
KL+I+ +A++++ P
Sbjct: 402 LKLEILTTIATESSIP 417
>05_07_0048 +
27321906-27322190,27322897-27323441,27323552-27323638,
27323878-27324116,27324909-27325114,27325227-27325310
Length = 481
Score = 32.7 bits (71), Expect = 0.24
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 80 LLTALNECTEWGQVFILDALSNYSPRDAREAH--SICERITPRLAHANAAVVLSAVKVLM 253
L +AL C EW IL LS P E+ SIC R+ L N SAV ++M
Sbjct: 270 LPSALMLCFEWWSFEILVLLSGLLPNPELESSVLSICTRVANELGAGNPEGARSAVHLVM 329
Query: 254 S 256
S
Sbjct: 330 S 330
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 298 LSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMK 426
LS L PP + S+ P+ Y ALR + L+ +K P L+H M+
Sbjct: 28 LSCVLQPPTPSSSSSRPDDDYAALRRL-LLRRKPPSALQHRME 69
>06_03_0237 +
18576317-18576412,18577273-18577778,18577906-18578024,
18578409-18578763,18578803-18578866,18578967-18579231,
18579354-18579529
Length = 526
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 59 NAPTINKLLTALNECTEWGQVFILDALSNYSPRDAREAHSICERITPRLAH 211
NA INKLL NECT F DA + + +D A ++ R P + H
Sbjct: 210 NANDINKLLEFFNECTLQNPKFYWDAQLDENDQDPAMAVAV-GRCFPGIIH 259
>01_06_1397 -
37017468-37017561,37017763-37017836,37019128-37019193,
37019543-37019623,37019735-37019943,37020096-37020192,
37020497-37020514,37020597-37020727,37021040-37021088,
37021450-37021539,37021616-37021721,37021815-37021885,
37021963-37022037,37022059-37022120,37022677-37022887,
37023599-37024069,37024387-37024719
Length = 745
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 452 GSLYFTKNTFISCLSMSGRFCTTRLMFRS 366
GSL T + F++ L GR C +R+ FRS
Sbjct: 510 GSLATTPSLFVTVLQEIGRLCESRVEFRS 538
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 28.3 bits (60), Expect = 5.2
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 379 NLVVQKRPDILKHEMKVFFVKYNDPIYV 462
NLV++++ D K+E+ F ++N P+++
Sbjct: 127 NLVIRRKNDTSKYEVYAFEAQHNHPLFI 154
>02_04_0107 - 19804730-19805044
Length = 104
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 497 LPKPHSPGARGTEGVCHRSGRGLRPEGRQGYRQMRHQGR 613
L P P A T +C+R +G +GR+G+R+ R QGR
Sbjct: 22 LAPPLRPTAEATV-ICNRGRQGRHHQGRRGHRR-RCQGR 58
>01_01_0604 -
4493868-4494028,4494538-4494746,4495860-4496003,
4496298-4496539
Length = 251
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 434 KNTFISCLSMSGRFCTTRLMFRSATYCTSGSALSSVTSGGASLRDSVL 291
K T++ G+ CT + + C S L+ SGG S RD+V+
Sbjct: 181 KGTYVGLQKFGGKRCTPESV--ALALCQSEPVLNDGQSGGDSSRDNVI 226
>02_01_0478 -
3442222-3442227,3442777-3442848,3442966-3443137,
3443388-3443500,3443771-3443908,3444016-3444221,
3444317-3444388,3444484-3444532,3444635-3444714,
3444817-3445132,3445242-3445415,3445513-3446139,
3446235-3446297,3446399-3446470,3446602-3446664,
3446741-3446872,3447779-3447889,3449273-3449371,
3450117-3450194
Length = 880
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 262 EMVSADTELVSTLSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMKVFFV 438
E A+ E + LS +PP LLSA Q+ + + + I++HE+ + V
Sbjct: 32 EETQAEAEAETPLSTIFSPPAENLLSAPGTAQFQSTCTFKISDYGKLKIIRHELSLMRV 90
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 59 NAPTINKLLTALNECTEWGQVFILDA 136
NA INKLL NECT F DA
Sbjct: 892 NADDINKLLEFFNECTLQNTKFYWDA 917
>09_06_0195 -
21477817-21478119,21478216-21478366,21478459-21478696,
21478786-21478996,21479162-21479361,21479453-21479545,
21479722-21481093
Length = 855
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 546 WHTPSVPRAPGLCGLGSQSDHYVQFLQFNVDR 451
W +P P +PG G SD +VQF +N R
Sbjct: 188 WKSPEDP-SPGSFSYGGDSDTFVQFFIWNGSR 218
>05_05_0185 +
23064249-23064448,23064881-23064950,23065082-23065120,
23065639-23066067,23067322-23067627
Length = 347
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 512 SPGARGTEGVCHRSGRGLRPEGRQGYRQMRHQG 610
SPG RG +G C R + R R R++RH G
Sbjct: 143 SPGCRGADGRCSRRWKEAR--NRALSRRIRHDG 173
>01_06_0418 +
29210310-29210612,29211154-29211541,29211946-29212143,
29212626-29213092,29213210-29213749,29214275-29214477,
29214567-29214624
Length = 718
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 253 ELMEMVSADTELVSTLSRKLAPPLVTLLS-AEPEVQYVALRNINLVVQKRP 402
E+++ + T L S L +V LL+ PEV Y N++++++ RP
Sbjct: 324 EIVQSLQTATGLPKAASPALGGLIVGLLALVYPEVLYWGFENVDILLESRP 374
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,405
Number of Sequences: 37544
Number of extensions: 289576
Number of successful extensions: 959
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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