Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021023
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         27   0.64 
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   3.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   6.0  

>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 491 DWLPKPHSPGARGTEGVCHRSGRGLRPEGRQGYRQMRHQGRA 616
           DW+ +PH   A   +G CH + R    E      Q R QG A
Sbjct: 196 DWIIRPHGYYANYCKGSCHLADR-FSSEYHYVIDQYRRQGGA 236


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 381 PRRAEATRHTQTRDEGVLC 437
           PRR    R+ +TRDE + C
Sbjct: 324 PRRCSRARYNETRDEHMGC 342


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 572 PDEVHVHFGGILLQFPEHLGYV 507
           P+EV + FGG+ + F   + Y+
Sbjct: 788 PEEVFITFGGVNVPFSRSIKYL 809


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,900
Number of Sequences: 2352
Number of extensions: 10234
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)