Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021021
(795 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0327 + 2659822-2660232,2660906-2660959 32 0.46
02_01_0349 + 2511112-2511576 31 1.4
11_01_0771 + 6453130-6454488 30 1.8
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366... 30 2.4
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867... 29 3.2
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 29 3.2
11_03_0122 - 10313934-10314069,10315889-10316319 29 4.3
06_01_0326 + 2372176-2373057,2373146-2373610 29 4.3
10_08_0338 + 16916429-16916650,16916728-16917900 29 5.6
09_03_0132 + 12639828-12639972,12640171-12640250 29 5.6
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 29 5.6
08_01_0797 + 7711772-7712869 28 7.4
07_01_0091 - 692416-693906 28 7.4
02_03_0258 - 16930027-16930485,16930686-16930991 28 7.4
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 28 9.8
08_01_1039 + 10548266-10548619,10548734-10549213,10549408-105495... 28 9.8
07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663... 28 9.8
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 28 9.8
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 28 9.8
03_06_0063 - 31391870-31392679 28 9.8
03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759 28 9.8
02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213 28 9.8
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 28 9.8
01_06_1691 - 39215192-39215283,39215341-39215413,39215874-392166... 28 9.8
01_06_1443 - 37399670-37400380 28 9.8
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078 28 9.8
>01_01_0327 + 2659822-2660232,2660906-2660959
Length = 154
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 384 SSPALLGHHEASSRAPQAPPV-APRSPILQPLPV 286
SSP LG AS+R APP PR P L PL V
Sbjct: 92 SSPRTLGRSSASARGDDAPPFHLPRRPPLPPLLV 125
>02_01_0349 + 2511112-2511576
Length = 154
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 272 RNWLTTGSGCRMGERGATG-GAWGARDDASWWPSSAGEL 385
RNW G GCR G TG GAR W GE+
Sbjct: 32 RNWRRGGDGCRSGGWQDTGETVMGARSAGRWSQRMGGEI 70
>11_01_0771 + 6453130-6454488
Length = 452
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 347 DDASWWPSSAGELQHQQ--QLNEEIGTSTATTSQQM 448
DD S WP G++QH+ ++NEE + A T +M
Sbjct: 375 DDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRM 410
>01_06_1598 +
38535077-38535368,38536381-38536463,38536575-38536643,
38537127-38537182,38537275-38537354,38537496-38537578,
38537682-38537759,38538133-38538201,38538366-38538434,
38538520-38538566,38538656-38538746,38538839-38538892
Length = 356
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 287 TGSGCRMGERGATGGAWGARDDASWW 364
+G G R+G RGA GG G D +WW
Sbjct: 38 SGGGGRLGARGAAGG--GRGDLGAWW 61
>03_06_0033 -
31186076-31186189,31186274-31186396,31186524-31186718,
31186805-31186930,31187024-31187186,31187270-31187405,
31187557-31187916,31188026-31188124,31188222-31188489
Length = 527
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 390 CCSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVVN 280
C SS L ASS P PP P + I QP+P+V+
Sbjct: 177 CSSSGGGLKESAASSTRPPFPPSIPSNKI-QPMPIVS 212
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 369 LGHHEASSRAPQAPPVAPRSPILQPLPVVN 280
L HH A++RAP PP PR L VV+
Sbjct: 14 LPHHRATTRAPPTPPRIPRRARLPGRSVVS 43
>11_03_0122 - 10313934-10314069,10315889-10316319
Length = 188
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 373 ATWPPRGIVARTPSAPRRAPFTHPTTA-ACGQPVPLCILSFR 251
A W RG++ T + R P P A C P PL +L R
Sbjct: 103 AKWAARGVIQVTVTHHRTPPLRQPGEARVCRPPPPLLVLPVR 144
>06_01_0326 + 2372176-2373057,2373146-2373610
Length = 448
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/31 (32%), Positives = 23/31 (74%)
Frame = -3
Query: 697 VVGSTDDSVEYRSLVDCFDRFLDLTDSATSV 605
V+GS++ +++ S+ +C D +D+TD +T++
Sbjct: 252 VMGSSNIWIDHVSMSNCSDGLIDITDGSTAI 282
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Frame = +2
Query: 290 GSGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQ--------- 442
GSG + G GA G WG + + + S G N A TSQ
Sbjct: 310 GSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAWNNSSAGGNAPTSQAAGAGTGYG 369
Query: 443 -QMYSYKMSGGFTSNGNN 493
Q Y Y GG S GN+
Sbjct: 370 SQGYGYGGYGGDASYGNH 387
>09_03_0132 + 12639828-12639972,12640171-12640250
Length = 74
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 357 EASSRAPQAPPVAPRSPILQPLPVVNQFLYVFCPFEAV*DILNLC 223
+ + RA PP+ P SP LP+ +Q Y FC V + C
Sbjct: 30 QETCRALCLPPLCPLSPYPARLPIDDQNTYEFCSVFLVHTAMRKC 74
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 375 ALLGHHEASSRAPQAPPVAPRSPILQPLP 289
A HH PQAPP P QP+P
Sbjct: 2 AFFSHHHLQQPHPQAPPPPPPQQQQQPVP 30
>08_01_0797 + 7711772-7712869
Length = 365
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 399 CCWCCSSPALLGHHEASSRAPQAPPVAPRSPILQPLP--VVNQFLYVFC 259
C W SSP L ++S P++P PRS + +VN L V C
Sbjct: 102 CNWSRSSPRLFDSSDSSRFGPRSPLFIPRSDLEMEESGYIVNDRLTVEC 150
>07_01_0091 - 692416-693906
Length = 496
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 345 RAPQAPPVAPRSPIL-QPLPV 286
RAP PP APR+P+ PLP+
Sbjct: 222 RAPPPPPPAPRAPVYHHPLPL 242
>02_03_0258 - 16930027-16930485,16930686-16930991
Length = 254
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 272 RNWLTTGSGCRMGERGATGGAWGAR 346
R W S C+ GE A G WG R
Sbjct: 161 RVWAPMWSSCQQGEGDAGAGGWGGR 185
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 290 GSGCRMGERGATGGAWGARDDASWWPSSAGELQH 391
GSG GE G GG G R A WW GE QH
Sbjct: 682 GSGMGGGEWG--GGEMG-RIMAQWWMGRRGESQH 712
>08_01_1039 +
10548266-10548619,10548734-10549213,10549408-10549510,
10549550-10550175
Length = 520
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 557 NNGGTHQEV*THNKHLHRRRRISQIKKAIKT 649
NNG H+E+ N H H + ++Q+ + T
Sbjct: 258 NNGTVHKEIWGENNHAHIIKELAQLASLVPT 288
>07_01_0821 +
6631942-6632144,6632155-6632680,6634264-6634619,
6634683-6634877,6635419-6635623
Length = 494
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 380 ELQHQQQLNEEIGTSTATTSQQMYSYKMSG 469
EL+HQ+Q+N ++ +TA + S SG
Sbjct: 446 ELRHQEQMNRKLSIATAAEEAKQLSIPCSG 475
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 360 HEASSRAPQAPPVAPRSPILQPL 292
H A A + PP +PR P++ P+
Sbjct: 71 HRAGGEAHRPPPGSPRQPVISPM 93
>04_03_0496 +
16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 230 TYVMSSQSVLEFVTNNTKQNRMVKLMIFVFLSLRL 126
TY+ QS+ + NN + R++ L I FL+LR+
Sbjct: 883 TYIGDKQSLYLNLVNNLRLPRLIPLHIDTFLALRI 917
>03_06_0063 - 31391870-31392679
Length = 269
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 411 SSFNCCWC---CSSPALLGHHEASSRAPQAPPVAPRSPILQPLPV 286
+ F C C SS LG H+ S R P P +P+L P PV
Sbjct: 95 AEFKCSVCGKSFSSYQALGGHKTSHRVKL--PTPPAAPVLAPAPV 137
>03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759
Length = 417
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 374 RYLATTRHRRAHPK-RPPSRPVHPSYNR 294
R A H R P+ RPPS P HP + R
Sbjct: 191 RVRALHEHHRTPPRPRPPSPPQHPRHRR 218
>02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213
Length = 320
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 526 NSNTREASPRQQWWYSSGGVDSQQA-SSP 609
NSNT +A R W+S GV +QA +SP
Sbjct: 54 NSNTSKAQRRPGTWFSGNGVGVKQAPASP 82
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -3
Query: 442 LTCSGCTSAYFFI*LLLVLQFTCATWPPRGIVARTPSA-----PRRAPFTHPTTAACGQP 278
LT +S+ FF L+LVL +C+ P G R+P+A P P P T P
Sbjct: 6 LTPLSSSSSRFFFLLVLVLVLSCSL-PANGRTHRSPAAAASPSPGPGPSPAPATPRVVPP 64
Query: 277 VP 272
P
Sbjct: 65 AP 66
>01_06_1691 -
39215192-39215283,39215341-39215413,39215874-39216615,
39216730-39217985,39218080-39218187,39218289-39218474,
39218625-39218675
Length = 835
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 344 RDDASWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYNIELC 523
RD A P A + Q QQQ ++ G + T Y SGG T+ + +
Sbjct: 750 RDGAQPVPQQAQQQQQQQQQQQQAGETGNGTMVHSCRYLSSGGPTAQEIQHQTAQEVPHG 809
Query: 524 LILTQ 538
++L+Q
Sbjct: 810 IVLSQ 814
>01_06_1443 - 37399670-37400380
Length = 236
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3
Query: 679 DSVEYRSLVDCFDRFLDLTDSATSVKM 599
DSVEYR VDC+ R D +AT+V M
Sbjct: 198 DSVEYRPDVDCYIRVPD-PSNATAVAM 223
>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
Length = 455
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +2
Query: 251 SKGQNT*RNWLTTGSGC---RMGERGATGGAWGARDDASWW 364
S G+++ WL G R G G GG GA A WW
Sbjct: 83 SGGRSSPPGWLRPAGGGGRRRGGHGGGAGGGVGAGGGAEWW 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,892
Number of Sequences: 37544
Number of extensions: 402988
Number of successful extensions: 1911
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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