Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021021
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           27   0.88 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.7  
AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    24   4.7  
AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    23   8.2  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 0.88
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 308 GERGATGGAWGARDDASWWPSSAGE-LQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSN 484
           G+    GG  G +   S   +   +  Q QQQ  ++   S     QQ    + SG  T +
Sbjct: 387 GQSAQAGGPAGGQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQQQQQQQQQSGSATWS 446

Query: 485 GNNT 496
           G+NT
Sbjct: 447 GSNT 450


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 366  GHHEASSRAPQAPPVAPRSPILQPLP 289
            G  E    +P  PP+ PRS  L P P
Sbjct: 1095 GEVEEEEVSPPVPPIPPRSRRLPPSP 1120


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 651 STSERYSTESSVDPTTTAAGAKSNYST 731
           ST   YS++S+   TTT + + S++ST
Sbjct: 468 STYCTYSSDSTTTTTTTKSASTSSHST 494


>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +3

Query: 549 TSATMVVLIRRCRLTTSIFTDVAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYS 728
           TSA           TTS  T  A +  ++     +T+      ++ +  TT++   S  +
Sbjct: 67  TSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNST-T 125

Query: 729 TATKSITTAVAE 764
           T   + TTA +E
Sbjct: 126 TEAAATTTAASE 137



 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 642 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVA 761
           ++Q   +RY    +     T   A ++ +T +++ TTA A
Sbjct: 52  AQQRIQQRYGVTVATTSAATTTAATTSAATTSEATTTAAA 91


>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 378 PALLGHHEASSRAPQAPPVAPRSP 307
           P ++G +EA  R  Q P +  R+P
Sbjct: 84  PGVIGAYEAYRRTVQGPQLMQRNP 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,252
Number of Sequences: 2352
Number of extensions: 14600
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)