Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021021
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   7.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   10.0 

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 599 ACCESTPPDEYHHCCR 552
           +C + T PDE H  CR
Sbjct: 628 SCRQGTVPDETHSACR 643


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1

Query: 399 CCWCCSS 379
           CCWCC +
Sbjct: 12  CCWCCDN 18


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 498 LPVIISNYV*F*HKGSFTSATMV 566
           LP +ISNY+    +G F +  M+
Sbjct: 897 LPTLISNYIEAVKEGKFMNVNML 919


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 38  LFVIKGILVCFLNKVFCL 91
           + ++ G+LVC+LN    L
Sbjct: 555 IILLAGVLVCYLNTFLLL 572


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 38  LFVIKGILVCFLNKVFCL 91
           + ++ G+LVC+LN    L
Sbjct: 645 IILLAGVLVCYLNTFLLL 662


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 612 VAESVKSRKRSKQSTSERYSTESSVDPTTTAA 707
           VAE +  R+R KQ     YS   S +  T  A
Sbjct: 36  VAEELMGRRRWKQYQDTLYSGTRSSESLTAQA 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,458
Number of Sequences: 438
Number of extensions: 4465
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)