Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021020
(832 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 169 1e-41
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 169 1e-41
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 161 3e-39
BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/H... 37 0.10
BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein. 37 0.10
AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens ... 37 0.10
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 34 0.73
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 34 0.73
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 34 0.73
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 34 0.73
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 34 0.73
D63484-1|BAA09771.1| 944|Homo sapiens KIAA0150 protein. 33 1.3
BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type c... 33 1.3
BC034435-1|AAH34435.1| 335|Homo sapiens ZC3H3 protein protein. 33 1.3
BC032001-1|AAH32001.1| 297|Homo sapiens ZC3H8 protein protein. 33 1.3
BC001974-1|AAH01974.1| 498|Homo sapiens Unknown (protein for IM... 33 1.3
AK131416-1|BAD18563.1| 892|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK127776-1|BAC87128.1| 938|Homo sapiens protein ( Homo sapiens ... 33 1.3
AC092645-3|AAY14855.1| 266|Homo sapiens unknown protein. 33 1.3
AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein. 33 1.3
U19107-1|AAC13989.1| 507|Homo sapiens ZNF127 protein. 33 1.7
BC064838-1|AAH64838.1| 482|Homo sapiens makorin, ring finger pr... 33 1.7
BC044639-1|AAH44639.1| 507|Homo sapiens makorin, ring finger pr... 33 1.7
BC037400-1|AAH37400.1| 482|Homo sapiens makorin, ring finger pr... 33 1.7
BC025955-1|AAH25955.1| 482|Homo sapiens makorin, ring finger pr... 33 1.7
AM236048-1|CAJ84705.1| 329|Homo sapiens makorin-1 protein. 33 1.7
AF334161-1|AAK13496.1| 291|Homo sapiens zinc finger protein pro... 33 1.7
AF192793-1|AAF18979.1| 482|Homo sapiens makorin 1 protein. 33 1.7
AF192784-1|AAF17487.1| 482|Homo sapiens makorin 1 protein. 33 1.7
AF117233-1|AAF17214.1| 328|Homo sapiens znf-xp protein protein. 33 1.7
AB209298-1|BAD92535.1| 409|Homo sapiens makorin, ring finger pr... 33 1.7
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. 33 1.7
M96982-1|AAA36619.1| 240|Homo sapiens U2 snRNP auxiliary factor... 32 2.2
BC001923-1|AAH01923.1| 240|Homo sapiens U2 small nuclear RNA au... 32 2.2
BC001177-1|AAH01177.1| 240|Homo sapiens U2 small nuclear RNA au... 32 2.2
AP001748-2|BAA95534.1| 240|Homo sapiens U2 snRNP auxiliary fact... 32 2.2
AJ627978-1|CAF29556.1| 240|Homo sapiens U2 snRNP auxiliary fact... 32 2.2
BC021186-1|AAH21186.1| 202|Homo sapiens U2 small nuclear RNA au... 32 2.9
AY569437-1|AAT72770.3| 181|Homo sapiens U2 small nuclear RNA au... 32 2.9
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 3.9
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 3.9
BC040126-1|AAH40126.1| 659|Homo sapiens TRM1 tRNA methyltransfe... 31 5.1
BC032612-1|AAH32612.1| 511|Homo sapiens zinc finger, CCCH-type ... 31 5.1
BC021102-1|AAH21102.1| 426|Homo sapiens zinc finger CCCH-type c... 31 5.1
BC019338-1|AAH19338.1| 502|Homo sapiens ZGPAT protein protein. 31 5.1
BC018302-1|AAH18302.1| 630|Homo sapiens TRMT1 protein protein. 31 5.1
BC002492-1|AAH02492.1| 659|Homo sapiens TRM1 tRNA methyltransfe... 31 5.1
AL121845-8|CAI21879.1| 502|Homo sapiens zinc finger, CCCH-type ... 31 5.1
AL121845-7|CAC03670.1| 511|Homo sapiens zinc finger, CCCH-type ... 31 5.1
AL121845-6|CAI21880.1| 531|Homo sapiens zinc finger, CCCH-type ... 31 5.1
AK000251-1|BAA91031.1| 659|Homo sapiens protein ( Homo sapiens ... 31 5.1
AF220184-1|AAF67649.1| 397|Homo sapiens uncharacterized hypotha... 31 5.1
AF196479-1|AAG28495.1| 659|Homo sapiens N2,N2-dimethylguanosine... 31 5.1
AF109366-1|AAQ13514.1| 413|Homo sapiens MSTP012 protein. 31 5.1
AC018867-1|AAX88885.1| 426|Homo sapiens unknown protein. 31 5.1
AC005546-2|AAC33150.1| 656|Homo sapiens R29425_1 protein. 31 5.1
AB058750-1|BAB47476.2| 564|Homo sapiens KIAA1847 protein protein. 31 5.1
BC081541-1|AAH81541.1| 701|Homo sapiens poly (ADP-ribose) polym... 30 8.9
AL137255-1|CAB70657.1| 598|Homo sapiens hypothetical protein pr... 30 8.9
AL136766-1|CAB66700.1| 701|Homo sapiens hypothetical protein pr... 30 8.9
AK001901-1|BAA91968.1| 426|Homo sapiens protein ( Homo sapiens ... 30 8.9
AC025816-1|AAF66161.1| 178|Homo sapiens unknown protein. 30 8.9
>BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif protein
22 protein.
Length = 420
Score = 169 bits (410), Expect = 1e-41
Identities = 70/87 (80%), Positives = 80/87 (91%)
Frame = +3
Query: 249 KIGKECKICSRPFTVFRWCPGARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDA 428
K GKECKIC+RPFTVFRWCPG RMRFKKTE+CQTCSKLKNVCQTCLLDLEYGLPIQVRDA
Sbjct: 40 KYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDA 99
Query: 429 ALKVQDDLPRNEVNKEYYIQNLESQLS 509
L +DD+P+++VNKEYY QN+E ++S
Sbjct: 100 GLSFKDDMPKSDVNKEYYTQNMEREIS 126
Score = 161 bits (391), Expect = 3e-39
Identities = 67/85 (78%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 NSDPTQPTNSL-KSKGSSDLLVRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKP 685
NSD T+P L K+ +SD+L++LART PYYKRNRPH+CSFWVKGEC+RGEECPYRHEKP
Sbjct: 127 NSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKP 186
Query: 686 TDPDDPLADQNIKDRYYGVNDPVAE 760
TDPDDPLADQNIKDRYYG+NDPVA+
Sbjct: 187 TDPDDPLADQNIKDRYYGINDPVAD 211
Score = 88.2 bits (209), Expect = 3e-17
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +1
Query: 133 MATSKSTNTYNRQNWEDADFPILCQTCLGDNPYIRMTKEK*AKNVK 270
MATS +NTYNRQNWEDADFPILCQTCLG+NPYIRMTKEK K K
Sbjct: 1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECK 46
>AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
RIBONUCLEOPROTEIN RB97D. ).
Length = 420
Score = 169 bits (410), Expect = 1e-41
Identities = 70/87 (80%), Positives = 80/87 (91%)
Frame = +3
Query: 249 KIGKECKICSRPFTVFRWCPGARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDA 428
K GKECKIC+RPFTVFRWCPG RMRFKKTE+CQTCSKLKNVCQTCLLDLEYGLPIQVRDA
Sbjct: 40 KYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDA 99
Query: 429 ALKVQDDLPRNEVNKEYYIQNLESQLS 509
L +DD+P+++VNKEYY QN+E ++S
Sbjct: 100 GLSFKDDMPKSDVNKEYYTQNMEREIS 126
Score = 161 bits (391), Expect = 3e-39
Identities = 67/85 (78%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 NSDPTQPTNSL-KSKGSSDLLVRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKP 685
NSD T+P L K+ +SD+L++LART PYYKRNRPH+CSFWVKGEC+RGEECPYRHEKP
Sbjct: 127 NSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKP 186
Query: 686 TDPDDPLADQNIKDRYYGVNDPVAE 760
TDPDDPLADQNIKDRYYG+NDPVA+
Sbjct: 187 TDPDDPLADQNIKDRYYGINDPVAD 211
Score = 88.2 bits (209), Expect = 3e-17
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +1
Query: 133 MATSKSTNTYNRQNWEDADFPILCQTCLGDNPYIRMTKEK*AKNVK 270
MATS +NTYNRQNWEDADFPILCQTCLG+NPYIRMTKEK K K
Sbjct: 1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECK 46
>U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein.
Length = 367
Score = 161 bits (391), Expect = 3e-39
Identities = 67/85 (78%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 NSDPTQPTNSL-KSKGSSDLLVRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKP 685
NSD T+P L K+ +SD+L++LART PYYKRNRPH+CSFWVKGEC+RGEECPYRHEKP
Sbjct: 74 NSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKP 133
Query: 686 TDPDDPLADQNIKDRYYGVNDPVAE 760
TDPDDPLADQNIKDRYYG+NDPVA+
Sbjct: 134 TDPDDPLADQNIKDRYYGINDPVAD 158
>BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/His)
box polypeptide 57 protein.
Length = 1386
Score = 36.7 bits (81), Expect = 0.10
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 599 KRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRY 733
+ N +C F++KG C+ G +C ++HE P + ++++ D +
Sbjct: 298 QENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSH 342
>BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein.
Length = 658
Score = 36.7 bits (81), Expect = 0.10
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 599 KRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRY 733
+ N +C F++KG C+ G +C ++HE P + ++++ D +
Sbjct: 298 QENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSH 342
>AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ32861 fis, clone TESTI2003589. ).
Length = 433
Score = 36.7 bits (81), Expect = 0.10
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 599 KRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRY 733
+ N +C F++KG C+ G +C ++HE P + ++++ D +
Sbjct: 196 QENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSH 240
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.73
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC W++G C++G++C + HE
Sbjct: 67 VCKHWLRGLCKKGDQCEFLHE 87
Score = 31.5 bits (68), Expect = 3.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
VC F++K C +G CP+RH
Sbjct: 40 VCEFFLKAACGKGGMCPFRH 59
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.73
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC W++G C++G++C + HE
Sbjct: 67 VCKHWLRGLCKKGDQCEFLHE 87
Score = 31.5 bits (68), Expect = 3.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
VC F++K C +G CP+RH
Sbjct: 40 VCEFFLKAACGKGGMCPFRH 59
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.73
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC W++G C++G++C + HE
Sbjct: 67 VCKHWLRGLCKKGDQCEFLHE 87
Score = 31.5 bits (68), Expect = 3.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
VC F++K C +G CP+RH
Sbjct: 40 VCEFFLKAACGKGGMCPFRH 59
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 33.9 bits (74), Expect = 0.73
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC W++G C++G++C + HE
Sbjct: 67 VCKHWLRGLCKKGDQCEFLHE 87
Score = 31.5 bits (68), Expect = 3.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
VC F++K C +G CP+RH
Sbjct: 40 VCEFFLKAACGKGGMCPFRH 59
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.73
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC W++G C++G++C + HE
Sbjct: 67 VCKHWLRGLCKKGDQCEFLHE 87
Score = 31.5 bits (68), Expect = 3.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
VC F++K C +G CP+RH
Sbjct: 40 VCEFFLKAACGKGGMCPFRH 59
>D63484-1|BAA09771.1| 944|Homo sapiens KIAA0150 protein.
Length = 944
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 530 TNSLKSKGSSDLLVRLARTAPYYKRNRPHVCSFWVK-GECRRGEECPYRHE 679
+ SL S+ L + R A + R C ++ + G C RGE CPY H+
Sbjct: 640 SRSLASRAVQRSLA-IIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHD 689
>BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type
containing 3 protein.
Length = 948
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 530 TNSLKSKGSSDLLVRLARTAPYYKRNRPHVCSFWVK-GECRRGEECPYRHE 679
+ SL S+ L + R A + R C ++ + G C RGE CPY H+
Sbjct: 644 SRSLASRAVQRSLA-IIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHD 693
>BC034435-1|AAH34435.1| 335|Homo sapiens ZC3H3 protein protein.
Length = 335
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 530 TNSLKSKGSSDLLVRLARTAPYYKRNRPHVCSFWVK-GECRRGEECPYRHE 679
+ SL S+ L + R A + R C ++ + G C RGE CPY H+
Sbjct: 31 SRSLASRAVQRSLA-IIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHD 80
>BC032001-1|AAH32001.1| 297|Homo sapiens ZC3H8 protein protein.
Length = 297
Score = 33.1 bits (72), Expect = 1.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 608 RPHVCSFWVKGECRRGEECPYRHEK 682
+ +C F+V+G C RGE C Y H +
Sbjct: 222 KKEMCKFYVQGYCTRGENCLYLHNE 246
>BC001974-1|AAH01974.1| 498|Homo sapiens Unknown (protein for
IMAGE:3457069) protein.
Length = 498
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 530 TNSLKSKGSSDLLVRLARTAPYYKRNRPHVCSFWVK-GECRRGEECPYRHE 679
+ SL S+ L + R A + R C ++ + G C RGE CPY H+
Sbjct: 194 SRSLASRAVQRSLA-IIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHD 243
>AK131416-1|BAD18563.1| 892|Homo sapiens protein ( Homo sapiens
cDNA FLJ16526 fis, clone OCBBF2006987. ).
Length = 892
Score = 33.1 bits (72), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 608 RPHVCSFWVKGECRRGEECPYRHEK 682
R +C F+++G C +GE C Y H +
Sbjct: 281 RKEICKFYLQGYCTKGENCIYMHNE 305
>AK127776-1|BAC87128.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ45877 fis, clone OCBBF3008835. ).
Length = 938
Score = 33.1 bits (72), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 608 RPHVCSFWVKGECRRGEECPYRHEK 682
R +C F+++G C +GE C Y H +
Sbjct: 105 RKEICKFYLQGYCTKGENCIYMHNE 129
>AC092645-3|AAY14855.1| 266|Homo sapiens unknown protein.
Length = 266
Score = 33.1 bits (72), Expect = 1.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 608 RPHVCSFWVKGECRRGEECPYRHEK 682
+ +C F+V+G C RGE C Y H +
Sbjct: 197 KKEMCKFYVQGYCTRGENCLYLHNE 221
>AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein.
Length = 1135
Score = 33.1 bits (72), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 608 RPHVCSFWVKGECRRGEECPYRHEK 682
R +C F+++G C +GE C Y H +
Sbjct: 249 RKEICKFYLQGYCTKGENCIYMHNE 273
>U19107-1|AAC13989.1| 507|Homo sapiens ZNF127 protein.
Length = 507
Score = 32.7 bits (71), Expect = 1.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
+C +++ G+C+ GE C Y H+
Sbjct: 100 ICRYYIHGQCKEGENCRYSHD 120
>BC064838-1|AAH64838.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>BC044639-1|AAH44639.1| 507|Homo sapiens makorin, ring finger
protein, 3 protein.
Length = 507
Score = 32.7 bits (71), Expect = 1.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
+C +++ G+C+ GE C Y H+
Sbjct: 100 ICRYYIHGQCKEGENCRYSHD 120
>BC037400-1|AAH37400.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>BC025955-1|AAH25955.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>AM236048-1|CAJ84705.1| 329|Homo sapiens makorin-1 protein.
Length = 329
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>AF334161-1|AAK13496.1| 291|Homo sapiens zinc finger protein
protein.
Length = 291
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 608 RPHVCSFWVKGECRRGEECPYRHEK 682
+ +C F+V+G C RGE C Y H +
Sbjct: 222 KKEMCKFYVQGFCSRGENCLYLHNE 246
>AF192793-1|AAF18979.1| 482|Homo sapiens makorin 1 protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>AF192784-1|AAF17487.1| 482|Homo sapiens makorin 1 protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>AF117233-1|AAF17214.1| 328|Homo sapiens znf-xp protein protein.
Length = 328
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 121
>AB209298-1|BAD92535.1| 409|Homo sapiens makorin, ring finger
protein, 1 variant protein.
Length = 409
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHEKPTDPDDPLADQ 715
VC ++ +G C G+ C Y H KP ++ A +
Sbjct: 86 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 118
>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
Length = 1315
Score = 32.7 bits (71), Expect = 1.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
+C F++ G C R E CPY H
Sbjct: 436 LCKFYITGFCARAENCPYMH 455
>M96982-1|AAA36619.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGACRHGDRCSRLHNKPT 41
>BC001923-1|AAH01923.1| 240|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 240
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGACRHGDRCSRLHNKPT 41
>BC001177-1|AAH01177.1| 240|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 240
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGACRHGDRCSRLHNKPT 41
>AP001748-2|BAA95534.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGACRHGDRCSRLHNKPT 41
>AJ627978-1|CAF29556.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGACRHGDRCSRLHNKPT 41
>BC021186-1|AAH21186.1| 202|Homo sapiens U2 small nuclear RNA
auxiliary factor 1-like 4 protein.
Length = 202
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGVCRHGDRCSRLHNKPT 41
>AY569437-1|AAT72770.3| 181|Homo sapiens U2 small nuclear RNA
auxiliary factor 1-like 3 splicing variant 1 protein.
Length = 181
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G+ C H KPT
Sbjct: 18 CSFYFKIGVCRHGDRCSRLHNKPT 41
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 31.5 bits (68), Expect = 3.9
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
+C ++KG+C+RG +C +RH
Sbjct: 139 ICRDFLKGDCQRGAKCKFRH 158
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 31.5 bits (68), Expect = 3.9
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRH 676
+C ++KG+C+RG +C +RH
Sbjct: 139 ICRDFLKGDCQRGAKCKFRH 158
>BC040126-1|AAH40126.1| 659|Homo sapiens TRM1 tRNA
methyltransferase 1 homolog (S. cerevisiae) protein.
Length = 659
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 620 CSFWVKGECRRGEECPYRHEKPT 688
C + +G C+RG++C Y H PT
Sbjct: 606 CKRFKEGTCQRGDQCCYSHSPPT 628
>BC032612-1|AAH32612.1| 511|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 511
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDD--PLADQNIKDRYYG 739
VR+ P +K +P C F+++G+CR E C + H + D+ P D ++ G
Sbjct: 165 VRVLYLYPTHKSLKP--CPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAG 221
>BC021102-1|AAH21102.1| 426|Homo sapiens zinc finger CCCH-type
containing 15 protein.
Length = 426
Score = 31.1 bits (67), Expect = 5.1
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC+F+ +G+C +G++C + H+
Sbjct: 104 VCAFFKQGQCTKGDKCKFSHD 124
>BC019338-1|AAH19338.1| 502|Homo sapiens ZGPAT protein protein.
Length = 502
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDD--PLADQNIKDRYYG 739
VR+ P +K +P C F+++G+CR E C + H + D+ P D ++ G
Sbjct: 165 VRVLYLYPTHKSLKP--CPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAG 221
>BC018302-1|AAH18302.1| 630|Homo sapiens TRMT1 protein protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 620 CSFWVKGECRRGEECPYRHEKPT 688
C + +G C+RG++C Y H PT
Sbjct: 577 CKRFKEGTCQRGDQCCYSHSPPT 599
>BC002492-1|AAH02492.1| 659|Homo sapiens TRM1 tRNA
methyltransferase 1 homolog (S. cerevisiae) protein.
Length = 659
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 620 CSFWVKGECRRGEECPYRHEKPT 688
C + +G C+RG++C Y H PT
Sbjct: 606 CKRFKEGTCQRGDQCCYSHSPPT 628
>AL121845-8|CAI21879.1| 502|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 502
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDD--PLADQNIKDRYYG 739
VR+ P +K +P C F+++G+CR E C + H + D+ P D ++ G
Sbjct: 165 VRVLYLYPTHKSLKP--CPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAG 221
>AL121845-7|CAC03670.1| 511|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 511
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDD--PLADQNIKDRYYG 739
VR+ P +K +P C F+++G+CR E C + H + D+ P D ++ G
Sbjct: 165 VRVLYLYPTHKSLKP--CPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAG 221
>AL121845-6|CAI21880.1| 531|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 531
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDD--PLADQNIKDRYYG 739
VR+ P +K +P C F+++G+CR E C + H + D+ P D ++ G
Sbjct: 165 VRVLYLYPTHKSLKP--CPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAG 221
>AK000251-1|BAA91031.1| 659|Homo sapiens protein ( Homo sapiens
cDNA FLJ20244 fis, clone COLF6450. ).
Length = 659
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 620 CSFWVKGECRRGEECPYRHEKPT 688
C + +G C+RG++C Y H PT
Sbjct: 606 CKRFKEGTCQRGDQCCYSHSPPT 628
>AF220184-1|AAF67649.1| 397|Homo sapiens uncharacterized
hypothalamus protein HT010 protein.
Length = 397
Score = 31.1 bits (67), Expect = 5.1
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC+F+ +G+C +G++C + H+
Sbjct: 104 VCAFFKQGQCTKGDKCKFSHD 124
>AF196479-1|AAG28495.1| 659|Homo sapiens N2,N2-dimethylguanosine
tRNA methyltransferase protein.
Length = 659
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 620 CSFWVKGECRRGEECPYRHEKPT 688
C + +G C+RG++C Y H PT
Sbjct: 606 CKRFKEGTCQRGDQCCYSHSPPT 628
>AF109366-1|AAQ13514.1| 413|Homo sapiens MSTP012 protein.
Length = 413
Score = 31.1 bits (67), Expect = 5.1
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC+F+ +G+C +G++C + H+
Sbjct: 104 VCAFFKQGQCTKGDKCKFSHD 124
>AC018867-1|AAX88885.1| 426|Homo sapiens unknown protein.
Length = 426
Score = 31.1 bits (67), Expect = 5.1
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC+F+ +G+C +G++C + H+
Sbjct: 104 VCAFFKQGQCTKGDKCKFSHD 124
>AC005546-2|AAC33150.1| 656|Homo sapiens R29425_1 protein.
Length = 656
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 620 CSFWVKGECRRGEECPYRHEKPT 688
C + +G C+RG++C Y H PT
Sbjct: 603 CKRFKEGTCQRGDQCCYSHSPPT 625
>AB058750-1|BAB47476.2| 564|Homo sapiens KIAA1847 protein protein.
Length = 564
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDD--PLADQNIKDRYYG 739
VR+ P +K +P C F+++G+CR E C + H + D+ P D ++ G
Sbjct: 218 VRVLYLYPTHKSLKP--CPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAG 274
>BC081541-1|AAH81541.1| 701|Homo sapiens poly (ADP-ribose)
polymerase family, member 12 protein.
Length = 701
Score = 30.3 bits (65), Expect = 8.9
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 614 HVCSFWVKGECRRGEECPYRHE 679
H+C ++++GEC+ G C H+
Sbjct: 179 HICQYFLQGECKFGTSCKRSHD 200
>AL137255-1|CAB70657.1| 598|Homo sapiens hypothetical protein
protein.
Length = 598
Score = 30.3 bits (65), Expect = 8.9
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 614 HVCSFWVKGECRRGEECPYRHE 679
H+C ++++GEC+ G C H+
Sbjct: 76 HICQYFLQGECKFGTSCKRSHD 97
>AL136766-1|CAB66700.1| 701|Homo sapiens hypothetical protein
protein.
Length = 701
Score = 30.3 bits (65), Expect = 8.9
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 614 HVCSFWVKGECRRGEECPYRHE 679
H+C ++++GEC+ G C H+
Sbjct: 179 HICQYFLQGECKFGTSCKRSHD 200
>AK001901-1|BAA91968.1| 426|Homo sapiens protein ( Homo sapiens
cDNA FLJ11039 fis, clone PLACE1004376. ).
Length = 426
Score = 30.3 bits (65), Expect = 8.9
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC+F+ +G C +G++C + H+
Sbjct: 104 VCAFFKQGRCTKGDKCKFSHD 124
>AC025816-1|AAF66161.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 30.3 bits (65), Expect = 8.9
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 614 HVCSFWVKGECRRGEECPYRHE 679
H+C ++++GEC+ G C H+
Sbjct: 70 HICQYFLQGECKFGTSCKRSHD 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,634,006
Number of Sequences: 237096
Number of extensions: 2637041
Number of successful extensions: 4937
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4937
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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