Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021020
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 135 4e-32
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 36 0.047
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z81485-3|CAB03977.1| 258|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 1.8
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 28 9.4
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 28 9.4
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 28 9.4
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 135 bits (326), Expect = 4e-32
Identities = 58/85 (68%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +2
Query: 515 DPTQPTNSLKS---KGSSDLLVRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEKP 685
D TQP + + + + D L R+ RT PYYKRN PH+CSF+VKGEC+RGEECPYRHEKP
Sbjct: 130 DGTQPIAQIANNMDQAAHDRLRRMGRTQPYYKRNAPHICSFFVKGECKRGEECPYRHEKP 189
Query: 686 TDPDDPLADQNIKDRYYGVNDPVAE 760
TDPDDPL+ QNI+DRYYG NDPVAE
Sbjct: 190 TDPDDPLSRQNIRDRYYGTNDPVAE 214
Score = 132 bits (319), Expect = 3e-31
Identities = 51/86 (59%), Positives = 69/86 (80%)
Frame = +3
Query: 249 KIGKECKICSRPFTVFRWCPGARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDA 428
K G+ECKIC RPFT FRW PG R+K TE+CQTC+K+KNVCQTC+ DLEYGLP+QVRD
Sbjct: 41 KYGRECKICERPFTTFRWQPGKGARYKNTELCQTCAKVKNVCQTCMFDLEYGLPVQVRDH 100
Query: 429 ALKVQDDLPRNEVNKEYYIQNLESQL 506
L++ D++P+ N+++++QN+E L
Sbjct: 101 ELQIADNIPKQGANRDFFLQNVERTL 126
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +1
Query: 133 MATSKST-NTYNRQNWEDADFPILCQTCLGDNPYIRMTKEK*AKNVKYAQ 279
M+ SKS+ + YNR+NWED+DFPILC+TCLG+NPY+RM K+K + K +
Sbjct: 1 MSMSKSSYSQYNRKNWEDSDFPILCETCLGNNPYMRMMKDKYGRECKICE 50
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 578 ARTAPYYKRNRPHVCS-FWVKGECRRGEECPYRHEKPTDPDDPLADQN 718
+RT PY R+ C F +G C RG++CPY H + D + D+N
Sbjct: 198 SRTPPYKSRSSRRRCKDFEERGYCIRGDQCPYYHGR----DPVVVDEN 241
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.14
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
VC W++G C++G++C + HE
Sbjct: 81 VCKHWLRGLCKKGDQCEFLHE 101
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 581 RTAPY--YKRNRPHVCSFWVKGECRRGEECPYRH 676
R PY ++ R VC ++ G C +G +C Y H
Sbjct: 147 RHGPYCKHRHRRRAVCPNYLAGFCLQGPDCQYAH 180
>Z81485-3|CAB03977.1| 258|Caenorhabditis elegans Hypothetical
protein C49F5.3 protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 284 FHSVSMVSWSKNAFQENGNMPDLFETEKCLSNMFIGFGIWSANPSERC 427
F SV+ S K AF++N DLFE E ++ F I ++ S+RC
Sbjct: 208 FTSVACESIRKGAFEKNETFDDLFEYETAYEDVL--FPIIQSSKSKRC 253
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 599 KRNRPHVCSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKD--RYYGVNDPVAE 760
++ C ++KG+CR G++C + H D + + +I ++Y P A+
Sbjct: 132 RKKSKFTCKNYLKGKCRFGDKCRFSHPVHNRSSDAVNEVSISSEAKFYTTETPEAQ 187
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 620 CSFWVK-GECRRGEECPYRHEKPT 688
CSF+ K G CR G++C H PT
Sbjct: 26 CSFFFKTGACRHGDKCSRAHHTPT 49
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 29.5 bits (63), Expect = 3.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 617 VCSFWVKGECRRGEECPYRHE 679
+C F+ +G CR G+ C Y H+
Sbjct: 170 ICKFFREGYCRDGDNCLYSHQ 190
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 311 SKNAFQENGNMPD-LFETEKCLSNMFIGFGIWSANPSERCCIKSSG*PTSKRS*QGILHT 487
S NA E G +P F + +N + FG A R +SS P + S G +
Sbjct: 676 SGNAPSEFGPVPSGSFGSPAGSNNGLVSFGSGPATTDPRVA-QSSLAPATPTSNGGPVVL 734
Query: 488 KLGESAVNSDPTQPTNSLKSKGSSD 562
G+S+ + P QP + S GS D
Sbjct: 735 SSGQSSTDFGPVQPGLTQASTGSVD 759
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 614 HVCSFWVKGECRRGEECPYRHEKPTDPDDP 703
++C F + G+C G C + H +P + + P
Sbjct: 34 NICHFNLVGKCSYGRACRFLHTRPRNDELP 63
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 539 LKSKGSSDLLVRLARTAPYYKRNRPHVCSFWV----KGECRRGEECPYRHEKPTDPDDP 703
++S DLL+ + Y + + +C ++ +G C G +C Y+H+ P DP
Sbjct: 280 VESGQEKDLLIEM-----YKENTKRKICKYYSNERSRGACPFGNKCFYKHQLPDGSIDP 333
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 614 HVCSFWVKGECRRGEECPYRHEKPTDPDDP 703
++C F + G+C G C + H +P + + P
Sbjct: 34 NICHFNLVGKCSYGRACRFLHTRPRNDELP 63
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 539 LKSKGSSDLLVRLARTAPYYKRNRPHVCSFWV----KGECRRGEECPYRHEKPTDPDDP 703
++S DLL+ + Y + + +C ++ +G C G +C Y+H+ P DP
Sbjct: 280 VESGQEKDLLIEM-----YKENTKRKICKYYSNERSRGACPFGNKCFYKHQLPDGSIDP 333
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 599 KRNRPHVCSFWVKGECRRGEECPYRHEKPTDP 694
++ R VC ++K C RG C + H P
Sbjct: 52 QQQRDDVCRDFLKNICNRGSRCKFYHPSEAPP 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,390,958
Number of Sequences: 27780
Number of extensions: 434819
Number of successful extensions: 1078
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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