Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021018
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 44 1e-04
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 44 1e-04
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 40 0.003
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 39 0.004
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 35 0.080
AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical ... 32 0.43
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 32 0.43
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 32 0.56
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 28 7.0
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 28 7.0
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +1
Query: 151 REVPRARIALQHNLGLGGAVVITMYRKGF 237
R+VP ++A+QHN+G+GGA V+ +YR GF
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGF 404
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +1
Query: 151 REVPRARIALQHNLGLGGAVVITMYRKGF 237
R+VP ++A+QHN+G+GGA V+ +YR GF
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGF 404
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 514 LISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQA 621
+ +GKLN QKAF GK+K++GN+ L KL + +A
Sbjct: 396 IAAGKLNAQKAFMSGKLKVKGNVMLLQKLQTVLEKA 431
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 514 LISGKLNPQKAFFQGKIKIQGNMGLAMKL 600
+ +GK+ P +AF QGK+K++GN+ AMKL
Sbjct: 77 IAAGKMKPDQAFMQGKMKLKGNIAKAMKL 105
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 287 FKVFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKVSYNGS 466
FK + ++E + TD++ +++KV + + G DG W I+AK V + S
Sbjct: 3 FKSDVIFEEIKERIATDKE-MVKKVGTSFRMTIA-GADGKTKVWTIDAKSDTPYVGDDSS 60
Query: 467 EKPDVTFTISDED 505
++ I D D
Sbjct: 61 RPVEIEINIKDSD 73
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 34.7 bits (76), Expect = 0.080
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 371 YGFKVRNGPDGAEGYWVINAKEGKGKVSYNGSEKPDV 481
YGFK P GYW I K G GKV++ +P V
Sbjct: 125 YGFKAAGTPGEIAGYWHIFKKFGSGKVTWKELVQPSV 161
>AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical
protein F54G2.1b protein.
Length = 972
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 281 GGFK-VFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRN-GPDGAEGYWVINAKEGKGKVS 454
GGFK + +Y K + ++ + + D+ + G K+ PDG E ++ + + K KVS
Sbjct: 265 GGFKGIGRYFKEVTQSARANSDDCTDDFLGCINMKLAEIPPDGLEQWFTLQPRSDKSKVS 324
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 281 GGFK-VFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRN-GPDGAEGYWVINAKEGKGKVS 454
GGFK + +Y K + ++ + + D+ + G K+ PDG E ++ + + K KVS
Sbjct: 249 GGFKGIGRYFKEVTQSARANSDDCTDDFLGCINMKLAEIPPDGLEQWFTLQPRSDKSKVS 308
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 514 LISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQ 618
L +GKL P A K++I G+M AMKL L R+
Sbjct: 378 LFTGKLRPTTALMTKKLQISGDMPGAMKLESLLRK 412
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 368 IYGFKVRNGPDGAEGYWVINAKEGKGKVSYNGSEKPDVT 484
+ G+K P G+W + G GKVS+ +P +T
Sbjct: 161 VMGYKSIATPSELHGFWTVFNMYGSGKVSWARLFQPSIT 199
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 368 IYGFKVRNGPDGAEGYWVINAKEGKGKVSYNGSEKPDVT 484
+ G+K P G+W + G GKVS+ +P +T
Sbjct: 191 VMGYKSIATPSELHGFWTVFNMYGSGKVSWARLFQPSIT 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,104,283
Number of Sequences: 27780
Number of extensions: 346647
Number of successful extensions: 844
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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