Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021016
(785 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein... 32 2.0
AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein... 32 2.0
AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein... 32 2.0
AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein... 32 2.0
AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein... 32 2.0
AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens ... 32 2.0
BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein. 30 8.2
BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein. 30 8.2
BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein. 30 8.2
BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein. 30 8.2
AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein. 30 8.2
AY007241-1|AAG01897.1| 516|Homo sapiens hyaluronan binding prot... 30 8.2
AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein. 30 8.2
AL365181-16|CAI13060.1| 671|Homo sapiens brevican protein. 30 8.2
AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein. 30 8.2
AF229053-1|AAG23135.1| 671|Homo sapiens chondroitin sulfate pro... 30 8.2
AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate pro... 30 8.2
AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 vari... 30 8.2
>BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
+SF+++R DDE +DE+ +K+++ LK+T
Sbjct: 306 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 335
>AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
+SF+++R DDE +DE+ +K+++ LK+T
Sbjct: 306 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 335
>AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
+SF+++R DDE +DE+ +K+++ LK+T
Sbjct: 249 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 278
>AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
+SF+++R DDE +DE+ +K+++ LK+T
Sbjct: 306 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 335
>AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
+SF+++R DDE +DE+ +K+++ LK+T
Sbjct: 249 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 278
>AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12577 fis, clone NT2RM4001047, highly similar to
MO25 PROTEIN. ).
Length = 289
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +3
Query: 159 TSFKRDRADDEYSSDEELPALKRVKQLKRT 248
+SF+++R DDE +DE+ +K+++ LK+T
Sbjct: 258 SSFQKERTDDEQFADEKNYLIKQIRDLKKT 287
>BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEKSLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AY007241-1|AAG01897.1| 516|Homo sapiens hyaluronan binding protein
protein.
Length = 516
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 423 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 478
>AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AL365181-16|CAI13060.1| 671|Homo sapiens brevican protein.
Length = 671
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AF229053-1|AAG23135.1| 671|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 671
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 483 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 538
>AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 variant
protein.
Length = 850
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 329 PIQLEAGHPSTSTPIEPVNQGSRIRNVPIKYI-----PVLENGSGTPARKPRIHTP 481
P +L + P S P EP Q + P + + L +G +R PR+H P
Sbjct: 422 PSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGP 477
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,674,081
Number of Sequences: 237096
Number of extensions: 2126994
Number of successful extensions: 4399
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4399
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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