Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021015
         (778 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC...    30   3.1  
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB...    30   3.1  
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA...    30   3.1  
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro...    29   9.4  
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio...    29   9.4  
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.    29   9.4  
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA...    29   9.4  
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD...    29   9.4  
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB...    29   9.4  
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC...    29   9.4  

>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
           isoform C protein.
          Length = 3604

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 255 EENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHN 389
           ++ ++      Q+HQ   + H + S  Q+ Q  Q  +N+S   HN
Sbjct: 565 QQQHQQQQQQQQQHQAHQQQHQRSSPAQVQQQQQQQMNSSRQSHN 609


>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
           isoform B protein.
          Length = 3604

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 255 EENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHN 389
           ++ ++      Q+HQ   + H + S  Q+ Q  Q  +N+S   HN
Sbjct: 565 QQQHQQQQQQQQQHQAHQQQHQRSSPAQVQQQQQQQMNSSRQSHN 609


>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
           isoform A protein.
          Length = 3604

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 255 EENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHN 389
           ++ ++      Q+HQ   + H + S  Q+ Q  Q  +N+S   HN
Sbjct: 565 QQQHQQQQQQQQQHQAHQQQHQRSSPAQVQQQQQQQMNSSRQSHN 609


>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
           protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 20  VPPGATPPPGIAMPKPHYQHD 40


>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
           corepressor Atro protein.
          Length = 1985

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 852 VPPGATPPPGIAMPKPHYQHD 872


>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
          Length = 1966

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 852 VPPGATPPPGIAMPKPHYQHD 872


>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
           isoform A protein.
          Length = 1966

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 852 VPPGATPPPGIAMPKPHYQHD 872


>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
           isoform D protein.
          Length = 1985

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 852 VPPGATPPPGIAMPKPHYQHD 872


>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
           isoform B protein.
          Length = 1985

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 852 VPPGATPPPGIAMPKPHYQHD 872


>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
           isoform C protein.
          Length = 1988

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 758 IPPALTPDPTVCHPD*HYFHD 696
           +PP  TP P +  P  HY HD
Sbjct: 852 VPPGATPPPGIAMPKPHYQHD 872


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,226,959
Number of Sequences: 53049
Number of extensions: 667486
Number of successful extensions: 2061
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)