Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021012X
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   4.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 464 SSDSCAETDEESGSE 508
           SSDSC++++E S S+
Sbjct: 405 SSDSCSDSEENSQSD 419


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 476 NCHYSALLVLISLDVLYQPLLFSGIW 399
           NC    +++ +S  V+ + +LF+ +W
Sbjct: 264 NCPRFLIMLALSYTVIQEVMLFTILW 289


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 155 KQSHH*QDEKTRSTQAPKA*NKGAKTEPSP 244
           +Q HH Q  ++ +T+AP A +  + +  SP
Sbjct: 16  QQFHHQQLFQSATTEAPAAYSSSSPSGSSP 45


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 155 KQSHH*QDEKTRSTQAPKA*NKGAKTEPSP 244
           +Q HH Q  ++ +T+AP A +  + +  SP
Sbjct: 16  QQFHHQQLFQSATTEAPAAYSSSSPSGSSP 45


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 431 ERPMKLKRVTPSSDSCAETD 490
           +RP  + +V PS+ + A+ D
Sbjct: 46  QRPQAILQVRPSTSAAADVD 65


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 450 FNFIGRSLSTFTLFRDL 400
           F  +GRSL+TF+ F+ L
Sbjct: 158 FYAMGRSLTTFSAFQIL 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,649
Number of Sequences: 336
Number of extensions: 1847
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)