Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021012X
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 1.5
AC024822-1|AAF59593.1| 117|Caenorhabditis elegans Hypothetical ... 29 2.0
Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 29 2.6
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.6
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 29 2.6
Z46794-9|CAA86781.1| 99|Caenorhabditis elegans Hypothetical pr... 28 3.4
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 28 3.4
AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical... 28 3.4
AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical... 28 3.4
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ... 28 3.4
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 4.6
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 4.6
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 27 6.0
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 27 6.0
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 6.0
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 27 8.0
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 27 8.0
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64599-3|AAB04561.1| 120|Caenorhabditis elegans Hypothetical pr... 27 8.0
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 27 8.0
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +2
Query: 299 ADMLDEGEQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSC 478
+D DE E+ ++ SK+ + S+ D EE+K S+KR K K+ + ++ + S +
Sbjct: 285 SDDEDEEEKPEKRSKKSKKAVIDSSSEDEEEEK-SSKKRSKKSKKESDEEQQASDSEEEV 343
Query: 479 AETDEESGSEWK 514
E + S S K
Sbjct: 344 VEVKKNSKSPKK 355
>AC024822-1|AAF59593.1| 117|Caenorhabditis elegans Hypothetical
protein Y55B1BL.1 protein.
Length = 117
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 344 LSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLK-RVTPSSDSCAETDEESGS 505
L +P+ N PD E + + + V +K +K + P++ C+ DE++ S
Sbjct: 38 LPHRPRCRVNFPDIENELEQQYQYVMNNKNSTRNMKDHLVPNNSKCSSDDEDNSS 92
>Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical
protein K06B4.8 protein.
Length = 378
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 20 ILKE-SIKLNQNLLKFITYYLLDSKTLIKSLKN 115
+LKE +IK +N KFI YY + +L+ LKN
Sbjct: 107 LLKELTIKDGKNYTKFINYYSNEDPSLVDVLKN 139
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 162 HTTNKMRKQGQLKLQRHRTKVQKQNHPQSKPKRITAARVSRL 287
H +++Q Q ++Q HR ++Q QN S+P + A++ ++
Sbjct: 1413 HQQQMVQQQQQQQMQMHRQQMQMQNQNMSQPFQPPTAQMLQM 1454
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 323 QQYILNR-LSKQPQLLSNIPDTEEQKTKSRKRV 418
++Y L R LS+QP L N D+EE++ +R+R+
Sbjct: 1168 EEYALERELSRQPILRLNGDDSEEEEEVTRRRI 1200
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 323 QQYILNR-LSKQPQLLSNIPDTEEQKTKSRKRV 418
++Y L R LS+QP L N D+EE++ +R+R+
Sbjct: 1168 EEYALERELSRQPILRLNGDDSEEEEEVTRRRI 1200
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 162 HTTNKMRKQGQLKLQRHRTKVQKQNHPQSKPKRITAARVSRL 287
H +++Q Q ++Q HR ++Q QN S+P + A++ ++
Sbjct: 1413 HQQQMVQQQQQQQMQMHRQQMQMQNQNMSQPFQPPTAQMLQM 1454
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 383 TEEQKTKSRKRVKVDKER-PMKLKRV-TPSSDSCAETDEESGS 505
+E++KT+S+K VK P + TPSS+ T+EESG+
Sbjct: 118 SEKKKTESKKAVKTTTTAAPAESAETETPSSEENKTTEEESGN 160
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 162 HTTNKMRKQGQLKLQRHRTKVQKQNHPQSKPKRITAARVSRL 287
H +++Q Q ++Q HR ++Q QN S+P + A++ ++
Sbjct: 1413 HQQQMVQQQQQQQMQMHRQQMQMQNQNMSQPFQPPTAQMLQM 1454
>Z46794-9|CAA86781.1| 99|Caenorhabditis elegans Hypothetical
protein R06F6.11 protein.
Length = 99
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 299 ADMLDEGEQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPS 466
A + DEGEQQ L +S Q + N+ E + +K +E+ M P+
Sbjct: 43 AGLADEGEQQLQLVDVSPQDEGQQNVAHVREMFSNVFNSIKTQREQAMAANGSQPT 98
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 425 DKERPMKLKRVTPSSDSCAETDEESGSE 508
DK + KLKR SSD E +EE+ SE
Sbjct: 267 DKAKMKKLKRKDSSSDEDEEDEEENSSE 294
>AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical
protein Y39B6A.33 protein.
Length = 438
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 383 TEEQKTKSRKRVKVDKERPMKLKRVTPSSDS 475
T+EQK K K K+DKE +L+ DS
Sbjct: 286 TKEQKKKKAKAQKLDKEEKRRLEEKAKEQDS 316
>AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical
protein F53G12.4 protein.
Length = 294
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 335 LNRLSKQPQLLSNIPDTEEQKTKS-RKRVKVDKERPMKLKRVT--PSSDSCAETDEESGS 505
+N + KQ L P ++E+ K+ RKR+++++ER +L S DS + +D + S
Sbjct: 77 INMVDKQRAPLKITPLSDEEFRKTMRKRMEMERERLARLSNQAEDDSDDSSSSSDSSTSS 136
>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
protein Y76B12C.7 protein.
Length = 1454
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 308 LDEGEQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKE 433
L E E Y + R S P+LL ++ EE+K + K + KE
Sbjct: 790 LPEMEVVYQIGRFSNVPELLVDLTVEEEEKERKAKAQQAAKE 831
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEES 499
S QP++++ P + S+KR + E + +K TP++ A EE+
Sbjct: 480 SVQPEVVNEEPKPSTSQPPSKKRKAENGEPAVAVKIATPATPVAAHPQEET 530
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEES 499
S QP++++ P + S+KR + E + +K TP++ A EE+
Sbjct: 480 SVQPEVVNEEPKPSTSQPPSKKRKAENGEPAVAVKIATPATPVAAHPQEET 530
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1594 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1624
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1616 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1646
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1407 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1437
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1714 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1744
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1594 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1624
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1616 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1646
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1407 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1437
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1714 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1744
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1425 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1455
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
SK+ + S+ PD + + T R+ + V++E+P
Sbjct: 1385 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1415
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 340 VQDVLLLALVEHISPHLARRLTLAAVIRLGLDWGWFCFCTF 218
+ D+ +++ ++ PH ARR T + DWG+ CF T+
Sbjct: 244 IADMRMISYKPNV-PHFARRTTHTYTSKEN-DWGYSCFMTW 282
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 340 VQDVLLLALVEHISPHLARRLTLAAVIRLGLDWGWFCFCTF 218
+ D+ +++ ++ PH ARR T + DWG+ CF T+
Sbjct: 244 IADMRMISYKPNV-PHFARRTTHTYTSKEN-DWGYSCFMTW 282
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 320 EQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEES 499
EQ+ ILNRL + + EQK KS + K PM L++ P+ A+ ++ S
Sbjct: 878 EQERILNRLRAAARKQKRKSEPVEQKQKSSQPSTSRKSAPMALQQ--PAEPRVAQLNDYS 935
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +2
Query: 350 KQPQLLSNIPDTEEQKTK---SRKRVKVDKERPMKLKRVTPSSDSCAETDEESGSEWK 514
K ++ S++ D+E++K + ++RVK+ K + +K KR S+D ++ D + +WK
Sbjct: 548 KMLEIRSSMSDSEKEKAEIENRKRRVKLTK-KLIKEKRGQTSNDRSSDED-DGEQQWK 603
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 174 KMRKQGQLKLQRHRTKVQKQNHPQSKPKRIT 266
+ R+Q Q + Q+ + + Q+Q +PQ +P++ T
Sbjct: 293 RQREQQQQQQQQQQQQQQRQQNPQQQPQQTT 323
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 380 DTEEQKTKS---RKRVKVDKERPMKLKRVTPSSDSCAETDEESGSE 508
D EEQK K RK+ K +K++ + KR+ + E D+E +
Sbjct: 151 DEEEQKRKEKERRKKEKREKKKRKEKKRLEKENRKIKEEDDEDSDD 196
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 335 LNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEE 496
L + K+ + L E++K K ++ + KER K +R S DS +EE
Sbjct: 125 LEKQRKKEKKLKKKAKKEKKKAKKLEKKERKKERKEKRRRRDDSDDSSDSDEEE 178
>U64599-3|AAB04561.1| 120|Caenorhabditis elegans Hypothetical
protein F56B6.6 protein.
Length = 120
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -1
Query: 435 RSLSTFTLFRDLVF-CSSVSGMLDKSCG---CLESL--FKMYCCSPSSSISA 298
R+LSTF LF LVF SS + D CG C+ + CC P +A
Sbjct: 3 RTLSTFLLFSVLVFKASSGACSSDSDCGGAPCVMDVKAGSHVCCKPKPGTTA 54
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 358 WLFGKPVQDVLLLALVEHI 302
WLFG + D +LL L +HI
Sbjct: 57 WLFGHEIADTVLLLLKDHI 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,731,857
Number of Sequences: 27780
Number of extensions: 172704
Number of successful extensions: 802
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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