Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021011
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 92 5e-19
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 67 2e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 2e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 56 3e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 5e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 6e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 48 8e-06
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 44 2e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 7e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 42 7e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 38 0.012
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 37 0.015
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.047
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.19
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.25
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 4.1
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 28 7.1
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 9.4
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 28 9.4
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 91.9 bits (218), Expect = 5e-19
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = +2
Query: 551 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 730
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 731 REQARDL 751
Q R+L
Sbjct: 173 GPQIREL 179
Score = 61.3 bits (142), Expect = 8e-10
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +1
Query: 313 RSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 83.8 bits (198), Expect = 1e-16
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621
Query: 704 TCVFGGAPKREQARDL 751
VFGG K EQ++ L
Sbjct: 622 VAVFGGGNKYEQSKAL 637
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPD 420
P + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+ ++ + Y +PT IQ Q PIA+SG+
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGR 555
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 691
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205
Query: 692 YVRNTCVFGGAPK 730
+R V GGA +
Sbjct: 206 GIRTVSVIGGADR 218
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + +
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNR 139
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQXFEEANFPDYVQQ 432
V QPF K+FY P + K +P E +E+R + E + V G P++ + + +
Sbjct: 59 VVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILD 118
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K Y++PTPIQAQ P+ MSG+
Sbjct: 119 VLKKNSYEKPTPIQAQAIPVIMSGR 143
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +2
Query: 539 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 718
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 719 GAPKREQARDL 751
G EQ +L
Sbjct: 181 GTGISEQIAEL 191
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMG 450
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 451 YKEPTPIQAQGWPIAMSGK 507
++ PTPIQ Q MSG+
Sbjct: 92 FQVPTPIQMQSLSCVMSGR 110
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPT 465
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 466 PIQAQGWPIAMSGK 507
PIQ Q P+ +SG+
Sbjct: 221 PIQMQVLPVLLSGR 234
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
QTGSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583
Query: 704 TCVFGGAPKREQARDL 751
+GG QA L
Sbjct: 584 CVCYGGVSVPYQASQL 599
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 361 VSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
VSG I F E F + + + GY+ PTP+Q PI M+G+
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGR 517
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 691
QTGSGKT A++LP + + N P A+ +APTRELA QI A F H +
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815
Query: 692 YVRNTCVFGGAPKREQARDL 751
+R +GG Q R L
Sbjct: 816 MLRPVVCYGGVSVSHQLRQL 835
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 749
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 694
+ Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH 187
Query: 695 VRNTCVFGGAPKREQARDL 751
V+ GG RE L
Sbjct: 188 VKCHACIGGTNVREDRMKL 206
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 694
+ +TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ + S
Sbjct: 116 QARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSN 173
Query: 695 VRNTCVFGGAPKREQ 739
+ C++GG P Q
Sbjct: 174 LEVYCIYGGMPYEPQ 188
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQXF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 493 AMSG 504
G
Sbjct: 197 MAHG 200
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 551 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 658
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 688
QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481
Query: 689 SYVRNTCVFGGAPKREQARDL 751
+ R+ + GG ++ DL
Sbjct: 482 ARFRSVGLIGGRKQKWMRDDL 502
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
+TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153
Query: 704 TCVFGGAP-KREQAR 745
+ GG K EQ R
Sbjct: 154 GLIIGGKDLKNEQKR 168
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 388 IQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++ F + G+ G+ PT IQ QG P+A+SG+
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGR 88
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 697
+ Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V
Sbjct: 40 QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSV 94
Query: 698 RNTCVFGGAPKREQARDL 751
+ GG E R L
Sbjct: 95 QCHACIGGTNIGEDIRKL 112
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382
Query: 704 TCVFGG 721
+ + GG
Sbjct: 383 SVILGG 388
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
+TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675
Query: 704 TCVFGGAPKREQARDL 751
+ GG ++ +A L
Sbjct: 676 GIIMGGVNRKAEAERL 691
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
+TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 52 KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 704 TCVFGGAPKREQARDL 751
+ GG +QA L
Sbjct: 107 AVIVGGLDMMKQALSL 122
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
+TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 704 TCVFGGAPKREQA 742
+ GG QA
Sbjct: 64 AVIVGGIDMMSQA 76
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 661
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Query: 662 QVAADFGHTSYVRNTCVFGG--APKREQ 739
+ V+ + GG APK+++
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQR 263
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 682
R + G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
FE+ + G+ G+ +P+PIQ + P+A++G+ LA
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 682
R + G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
FE+ + G+ G+ +P+PIQ + P+A++G+ LA
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2
Query: 611 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 751
P ALVL+PTRELA QIQ+V G V+ GG E R L
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKL 50
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 694
++Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202
Query: 695 VR-NTCVFGGA-PKREQARD 748
++ N V G P+ ++ D
Sbjct: 203 IKINYAVRGNQFPRGQKCTD 222
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 349 HEVTVSGVEVHNPI---QXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 501
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 694
+++TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254
Query: 695 V 697
V
Sbjct: 255 V 255
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 530 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 697
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 698 RNTCVFGGAPKREQ 739
R +FGG + ++
Sbjct: 294 RVQMIFGGGAEEDR 307
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 655
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGK 507
+ V +G+ PTPIQA P+A+ GK
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGK 48
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 373 EVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 486
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 388 IQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
I FE+ + + + V GYK+PTP+Q PI + GK
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPI-VKGK 912
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPP 592
QTGSGKT A+++P + I + P
Sbjct: 920 QTGSGKTAAFLIPILSRIYMEGP 942
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 227 QNMRRPDWDLFHSNLSTKTFMIHILQFSKD 316
+N RR WD FHSN+S + H+ F D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 694
+ ++G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G H
Sbjct: 56 QAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDG 110
Query: 695 VRNTCVFGGAPKREQARDL 751
+ GG E + L
Sbjct: 111 LACKVFIGGISLEEDKKAL 129
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 233 CSDLQRILFSHQILQILQIYCHRC-QIETN 147
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 164 CQIETNYRRICCLLQIWN-HRFHGYYSS 84
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 521 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 700
TQT +L +P +HIN+ P R PI + + PT+ + I ++ D ++ +
Sbjct: 430 TQTTKPASLRVNVPLSLHINDSSPTRL-SFPITMDVHPTKTTSVTI-PISEDMQTSTIAK 487
Query: 701 NTCVFGGAPKREQAR 745
T F + +E ++
Sbjct: 488 QTSSFPRSNDKEASK 502
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,450,560
Number of Sequences: 59808
Number of extensions: 464476
Number of successful extensions: 1212
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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