Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021009
(830 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 103 2e-23
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 103 2e-23
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 84 3e-17
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 61 2e-10
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 51 2e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 47 3e-06
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 46 7e-06
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 34 0.028
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 34 0.028
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 34 0.028
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 32 0.087
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 28 1.4
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.9
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 27 2.5
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 2.5
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 2.5
SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24 famil... 27 4.3
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 5.7
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 26 5.7
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 5.7
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 7.5
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 26 7.5
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 25 10.0
SPBC428.01c |nup107|SPBC582.11c|nucleoporin Nup107|Schizosacchar... 25 10.0
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 10.0
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 10.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 103 bits (248), Expect = 2e-23
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDF 435
F DTR DEQ+R +TIKSTAIS+F E+ + D+ + P FL+NLIDSPGHVDF
Sbjct: 56 FMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADGT----DFLVNLIDSPGHVDF 111
Query: 436 SSEVTAALRVTDGALVVVDCMSGV 507
SSEVTAALRVTDGALVVVD + GV
Sbjct: 112 SSEVTAALRVTDGALVVVDTIEGV 135
Score = 93.5 bits (222), Expect = 3e-20
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 510 VQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDG 689
VQTETVLRQA+ ERI+P++ +NK+DR YQ F R+VE+VNV+I+TY D
Sbjct: 137 VQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYDK- 195
Query: 690 GPMGEVRVDPSKGSVGFGSGLHGW 761
+G+ +V P KG+V F SGLHGW
Sbjct: 196 -VLGDCQVFPDKGTVAFASGLHGW 218
Score = 83.0 bits (196), Expect = 5e-17
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +2
Query: 92 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE 250
MV FT +E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGD 53
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 764 FTLKQFSEMYADKFKIDLVKLM 829
FT++QF+ YA KF ID K+M
Sbjct: 220 FTVRQFANRYAKKFGIDRNKMM 241
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 103 bits (248), Expect = 2e-23
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDF 435
F DTR DEQ+R +TIKSTAIS+F E+ + D+ + P FL+NLIDSPGHVDF
Sbjct: 56 FMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADGT----DFLVNLIDSPGHVDF 111
Query: 436 SSEVTAALRVTDGALVVVDCMSGV 507
SSEVTAALRVTDGALVVVD + GV
Sbjct: 112 SSEVTAALRVTDGALVVVDTIEGV 135
Score = 93.5 bits (222), Expect = 3e-20
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 510 VQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDG 689
VQTETVLRQA+ ERI+P++ +NK+DR YQ F R+VE+VNV+I+TY D
Sbjct: 137 VQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYDK- 195
Query: 690 GPMGEVRVDPSKGSVGFGSGLHGW 761
+G+ +V P KG+V F SGLHGW
Sbjct: 196 -VLGDCQVFPDKGTVAFASGLHGW 218
Score = 83.0 bits (196), Expect = 5e-17
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +2
Query: 92 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE 250
MV FT +E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGD 53
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 764 FTLKQFSEMYADKFKIDLVKLM 829
FT++QF+ YA KF ID K+M
Sbjct: 220 FTVRQFANRYAKKFGIDRNKMM 241
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 83.8 bits (198), Expect = 3e-17
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDF 435
F D R+DE R IT+KS+AIS+FF++ I+ D++ EK +LINLIDSPGHVDF
Sbjct: 56 FLDFREDEITRGITMKSSAISLFFKV-------ISQNDEKR-VEKDYLINLIDSPGHVDF 107
Query: 436 SSEVTAALRVTDGALVVVDCMSGV 507
SSEV++A R+ DGA V+VD + GV
Sbjct: 108 SSEVSSASRLCDGAFVLVDAVEGV 131
Score = 50.8 bits (116), Expect = 2e-07
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +2
Query: 110 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 247
+++ + + NIRN +++AHVDHGK+TL DSL++ GII+ AG
Sbjct: 7 EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAG 52
Score = 50.0 bits (114), Expect = 4e-07
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = +3
Query: 513 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY----- 677
QT TVLRQA +RIK IL +NKMDR + R+VE VN +I T+
Sbjct: 134 QTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNAVIGTFYTGEL 193
Query: 678 -----NDDGGPMGEVRVDPSKGSVGFGSGLHGW 761
ND+ + P +G+V F S GW
Sbjct: 194 MQLADNDEVISDEGIYFAPEQGNVVFASAYDGW 226
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 60.9 bits (141), Expect = 2e-10
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +1
Query: 277 EQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDFSSEVTAA 456
E+++ ITI+S A +E + N Q+ EK + IN+ID+PGH+DF+ EV A
Sbjct: 108 EREKGITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDFTIEVERA 165
Query: 457 LRVTDGALVVVDCMSGV 507
LRV DGA++V+ +SGV
Sbjct: 166 LRVLDGAVLVLCAVSGV 182
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 98 NFTVDEIRGMMDKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGII 229
N + E DKKR IRN+ + AH+D GK+T T+ ++ G I
Sbjct: 41 NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 50.8 bits (116), Expect = 2e-07
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDF 435
+TDT E++R ++IKST ++ L D+ K F ID+PGHVDF
Sbjct: 178 YTDTHYLERERVMSIKSTPLT----LAVSDM-----------KGKTFAFQCIDTPGHVDF 222
Query: 436 SSEVTAALRVTDGALVVVDCMSGVL 510
EV A + ++DG ++VVD + GV+
Sbjct: 223 VDEVAAPMAISDGVVLVVDVIEGVM 247
Score = 33.5 bits (73), Expect = 0.038
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +3
Query: 507 VVQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 686
++ T +++ AI + +L +NK+DR Y + +++ VN I + D
Sbjct: 247 MINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKD 306
Query: 687 GGPMGEVRVDPSKGSVGFGS 746
+ RV P G+V F S
Sbjct: 307 ----LKYRVSPELGNVCFAS 322
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 47.2 bits (107), Expect = 3e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1
Query: 388 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
+ +L+NLID+PGHVDF +EV +L +G +++VD G+
Sbjct: 122 QSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGI 161
Score = 43.2 bits (97), Expect = 5e-05
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 116 IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 229
+RG+ + +RN +VIAH+DHGKSTL+D ++ G+I
Sbjct: 50 VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI 85
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 46.0 bits (104), Expect = 7e-06
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 400 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
INLID+PGH DF+ EV ++ V DGA+ ++D +GV
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGV 130
Score = 34.7 bits (76), Expect = 0.016
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 143 NIRNMSVIAHVDHGKSTLTDSLVSKAG 223
+IRN+ +IAH+D GK+TLT+ ++ G
Sbjct: 27 SIRNVGIIAHIDAGKTTLTEKMLYYGG 53
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 513 QTETVLRQAIAERIKPILFMNKMDR 587
QT+ V +QA I ++F+NKMDR
Sbjct: 133 QTKVVWKQATKRGIPKVIFVNKMDR 157
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 32.3 bits (70), Expect = 0.087
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 409 IDSPGHVDFSSEVTAALRVTDGALVVVDCMSGVLYKPKQY 528
+D PGH D+ + DGA++VV G + + +++
Sbjct: 121 VDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREH 160
Score = 30.3 bits (65), Expect = 0.35
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 134 KKRNIRNMSVIAHVDHGKSTLTDSL 208
KK ++ N+ I HVDHGK+TLT ++
Sbjct: 50 KKPHV-NIGTIGHVDHGKTTLTAAI 73
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 412 DSPGHVDFSSEVTAALRVTDGALVVVD 492
D+PGH DF S + A D A++VVD
Sbjct: 261 DAPGHRDFISGMIAGASSADFAVLVVD 287
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 406 LIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
+ID+PGH F++ + + + A++V+D M G+
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGL 586
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 392 PFSLYSRWSGFVMNTK-SFSSSSKNIEMAVDLMVMQR 285
P S YS W+ V+NTK SFS ++M +L+ Q+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELIDGQK 203
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 155 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 253
++++ HVDHGK+TL D+ K+ I + G T
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGIT 205
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 440 EEKSTCPGESIKLIKKPFSLYSRWSGFVMNTKSFSS-SSKNIEMAVDLMVMQRSCSSLRV 264
EE + P + K KK S F+ T +S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 195
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 148 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQLPYASNGVRFEKG 17
DIPL + P D + RE + RW + +L + Y ++ F G
Sbjct: 102 DIPLRLIQPYDPLSRETVYMRWKELAMLDKTVDYQNHNQSFPFG 145
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 152 NMSVIAHVDHGKSTLTDSLVSKAGII 229
N+ I HVD GKSTL +++ G++
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV 265
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 434 KSTCPGESIKLIKKPFSLYSRWSGFVMNTKSFSSSSKNIEMAV 306
K+ GESI +I+ P YS + + TKS S S+N+E ++
Sbjct: 450 KAKLDGESI-IIEHP--TYSAFQQIIDRTKSLSFESQNLEQSL 489
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 5.7
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETLSLTRVRTNKTVASPLNLR-P 313
K+ ++N S + + + AG+ AG + + SL ++T A+P N R P
Sbjct: 155 KKPVKNSSSRDQPVRNSGATSTASLPPAGLRAGRGSQISASLAWLKTGGASAAPSNPRQP 214
Query: 314 SLCSSSLKRKI*YSSQTLTSV 376
S+ RK Y+S L +
Sbjct: 215 PPTSNFSNRKARYASNGLVQL 235
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = -1
Query: 491 STTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLYSRWSGFVMNTKSFSSSSKNIEM 312
+TTT +PS + S++ +S S+ S S S S ++ S SSSS + +
Sbjct: 149 TTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSV 208
Query: 311 AVDLMVMQRSCSSLRVSVKGS 249
+ SS S S
Sbjct: 209 PITSSTSSSHSSSSSSSSSSS 229
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 761 GFTLKQFSEMYADKFKI 811
G TL++FSE Y D+F +
Sbjct: 467 GLTLREFSEKYPDEFDV 483
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 581 HFVHEQNRLDALGNSLTQYCFGLYNTPDI 495
H++ N AL + T+ + LY TPD+
Sbjct: 144 HYIEITNAYRALTDDKTRENYALYGTPDV 172
>SPBC428.01c |nup107|SPBC582.11c|nucleoporin
Nup107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 794
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 542 NSLTQYCFGLYNTPDIQSTTTRAPSVTRSAAVTSE 438
NS+TQY +Y + T T+ P V +T E
Sbjct: 339 NSMTQYNLDVYLSSKAPQTETQLPPVDSGLGLTPE 373
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 148 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQL 53
D P + +H D ++E H RW + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 143 SASCPSSHGSRLP*NSPF*MVYDFCSIK 60
+ASCP SH L + PF + + C IK
Sbjct: 417 TASCPLSHSKLLLEHRPFQTLAEACIIK 444
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,500,685
Number of Sequences: 5004
Number of extensions: 74417
Number of successful extensions: 248
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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