Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021009
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 134 6e-32
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 132 2e-31
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 56 4e-08
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 56 4e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 52 5e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 49 5e-06
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 35 0.062
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 33 0.33
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 33 0.33
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 33 0.33
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.33
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 33 0.33
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 33 0.33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 32 0.44
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 32 0.44
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 32 0.44
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 1.0
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 30 1.8
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 30 1.8
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 30 2.3
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 4.1
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 4.1
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 5.4
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 29 5.4
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 29 5.4
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 7.1
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 9.4
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 9.4
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 28 9.4
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 134 bits (325), Expect = 6e-32
Identities = 70/92 (76%), Positives = 76/92 (82%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SE--------KGFLINLI 411
FTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+ +Q E E GFLINLI
Sbjct: 56 FTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLI 115
Query: 412 DSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
DSPGHVDFSSEVTAALRVTDGALVVVDC+SGV
Sbjct: 116 DSPGHVDFSSEVTAALRVTDGALVVVDCVSGV 147
Score = 132 bits (320), Expect = 2e-31
Identities = 62/84 (73%), Positives = 67/84 (79%)
Frame = +3
Query: 510 VQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDG 689
VQTETVLRQAIAERIKP+LFMNKMDR +QTFQRIVEN+NVIIATY DD
Sbjct: 149 VQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDD 208
Query: 690 GPMGEVRVDPSKGSVGFGSGLHGW 761
GPMG + VDPS G+VGFGSGLHGW
Sbjct: 209 GPMGPIMVDPSIGNVGFGSGLHGW 232
Score = 104 bits (250), Expect = 7e-23
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 253
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGET
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGET 54
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2
Query: 764 FTLKQFSEMYADKFKIDLVKLM 829
FTLKQF+EMYA KF + + KLM
Sbjct: 234 FTLKQFAEMYAGKFGVQVDKLM 255
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 132 bits (320), Expect = 2e-31
Identities = 62/84 (73%), Positives = 67/84 (79%)
Frame = +3
Query: 510 VQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDG 689
VQTETVLRQAIAERIKP+LFMNKMDR +QTFQRIVEN+NVIIATY DD
Sbjct: 149 VQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDD 208
Query: 690 GPMGEVRVDPSKGSVGFGSGLHGW 761
GPMG + VDPS G+VGFGSGLHGW
Sbjct: 209 GPMGPIMVDPSIGNVGFGSGLHGW 232
Score = 132 bits (318), Expect = 4e-31
Identities = 69/92 (75%), Positives = 75/92 (81%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SE--------KGFLINLI 411
FTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+ +Q E E GFLINLI
Sbjct: 56 FTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLI 115
Query: 412 DSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
DSPGHVDFSSEVTAAL VTDGALVVVDC+SGV
Sbjct: 116 DSPGHVDFSSEVTAALGVTDGALVVVDCVSGV 147
Score = 104 bits (250), Expect = 7e-23
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 253
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGET
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGET 54
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2
Query: 764 FTLKQFSEMYADKFKIDLVKLM 829
FTLKQF+EMYA KF + + KLM
Sbjct: 234 FTLKQFAEMYAGKFGVQVDKLM 255
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDF 435
+ D+R+DEQ R IT+KS+ IS+ E LINLIDSPGHVDF
Sbjct: 57 YMDSREDEQTRGITMKSSGISLLCE--------------------PLLINLIDSPGHVDF 96
Query: 436 SSEVTAALRVTDGALVVVDCMSGV 507
S EVT+AL ++D AL+++D + G+
Sbjct: 97 SGEVTSALILSDIALLLIDVIEGI 120
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 143 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE 250
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGK 54
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +3
Query: 513 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY----- 677
QTE ++RQ I IL +NK+DR YQ R++E VN I+
Sbjct: 123 QTEALIRQVIRNGQAMILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVLGGIV 182
Query: 678 --NDDGGPMGE----VRVDPSKGSVGFGSGLHGW 761
+D G + E + DP+KG+V F S LH +
Sbjct: 183 LEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSY 216
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 256 FTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRE*SEKGFLINLIDSPGHVDF 435
+ D+R+DEQ R IT+KS+ IS+ E LINLIDSPGHVDF
Sbjct: 57 YMDSREDEQTRGITMKSSGISLLCE--------------------PLLINLIDSPGHVDF 96
Query: 436 SSEVTAALRVTDGALVVVDCMSGV 507
S EVT+AL ++D AL+++D + G+
Sbjct: 97 SGEVTSALILSDIALLLIDVIEGI 120
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 143 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE 250
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGK 54
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +3
Query: 513 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY----- 677
QTE ++RQ I IL +NK+DR YQ R++E VN I+
Sbjct: 123 QTEALIRQVIRNGQAMILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVLGGIV 182
Query: 678 --NDDGGPMGE----VRVDPSKGSVGFGSGLHGW 761
+D G + E + DP+KG+V F S LH +
Sbjct: 183 LEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSY 216
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +1
Query: 388 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGVL 510
K +L+N+ID+PGHV+FS E+TA+ R+ DG +V+VD GV+
Sbjct: 199 KSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVM 239
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 507 VVQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 686
++ TE +R AI ER+ L ++K+DR Y + I++ VN I++T+ ++
Sbjct: 239 MMNTERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEE 298
Query: 687 GGPMGEVRVDPSKGSVGFGSG 749
P+ + P G+V F SG
Sbjct: 299 DVPV----LSPLNGNVIFSSG 315
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 125 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 217
+MD +RN+++ H+ HGK+T D L+ +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 155
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +1
Query: 388 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGVL 510
K +L+N+ID+PGHV+FS E+TA+ R+ DG +V+VD GV+
Sbjct: 74 KSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVM 114
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 507 VVQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 686
++ TE +R AI ER+ L ++K+DR Y + I++ VN I++T+ ++
Sbjct: 114 MMNTERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEE 173
Query: 687 GGPMGEVRVDPSKGSVGFGSG 749
P+ + P G+V F SG
Sbjct: 174 DVPV----LSPLNGNVIFSSG 190
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 217
MD +RN+++ H+ HGK+T D L+ +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 30
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +1
Query: 388 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
+G+L+NLID+PGHVDFS+EV+ +L V DG L++V GV
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGV 139
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 146 IRNMSVIAHVDHGKSTLTDSLVSKAGII 229
IRN ++AHVDHGKSTL D L+ G +
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAV 69
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +1
Query: 388 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
KG INLID+PGHVDF EV +RV DG +VV+D +GV
Sbjct: 88 KGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGV 127
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 146 IRNMSVIAHVDHGKSTLTDSLVSKAGII 229
+RN+ VIAHVD GK+T+T+ L+ AG I
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +1
Query: 391 GFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
G IN+ID+PGHVDF+ EV ALRV DGA++V+ + GV
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGV 149
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 146 IRNMSVIAHVDHGKSTLTDSLVSKAGII 229
IRN+ + AH+D GK+T+T+ ++ AG I
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRI 71
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 391 GFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
GFLI ID+PGH FS+ T + D A++VVD M G+
Sbjct: 550 GFLI--IDTPGHESFSNLRTRGSSLCDFAILVVDIMHGL 586
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 382 SEKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSGV 507
S G + LID PGH V AA V D A+V++D ++G+
Sbjct: 68 SLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI 109
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 400 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSG 504
I L+D+PGH DF S + D A++VV+ +G
Sbjct: 250 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 284
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 400 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSG 504
I L+D+PGH DF S + D A++VV+ +G
Sbjct: 268 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 302
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 394 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSG 504
+ I +ID+PGH DF + D A++VV C +G
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 394 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDC 495
+ I +ID+PGH DF + D A++VV C
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVAC 118
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 394 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSG 504
+ I +ID+PGH DF + D A++VV C +G
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 128 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 223
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 394 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCMSG 504
+ I +ID+PGH DF + D A++VV C +G
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 152 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 241
N+ I HVDHGK+TLT ++ GA+
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAK 80
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 409 IDSPGHVDFSSEVTAALRVTDGALVVVDCMSGVLYKPKQY 528
ID PGH D+ + +GA++VV G + + +++
Sbjct: 117 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREH 156
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 152 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 241
N+ I HVDHGK+TLT ++ GA+
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAK 81
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 409 IDSPGHVDFSSEVTAALRVTDGALVVVDCMSGVLYKPKQY 528
ID PGH D+ + +GA++VV G + + +++
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREH 157
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 152 NMSVIAHVDHGKSTLTDSLVSKAGIIAGAR 241
N+ I HVDHGK+TLT ++ GA+
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAK 81
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 409 IDSPGHVDFSSEVTAALRVTDGALVVVDCMSGVLYKPKQY 528
ID PGH D+ + +GA++VV G + + +++
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREH 157
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 131 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 253
D +R ++++ HVDHGK+TL D++ + I AG G T
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM-RNSQIAAGEFGGIT 190
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 152 NMSVIAHVDHGKSTLTDSL 208
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 412 DSPGHVDFSSEVTAALRVTDGALVVVDCMSGVLYKPKQYCV 534
D PGH DF + D A++V+ GV+ + K++ +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLI 154
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 152 NMSVIAHVDHGKSTLTDSL 208
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 412 DSPGHVDFSSEVTAALRVTDGALVVVDCMSGVLYKPKQYCV 534
D PGH DF + D A++V+ GV+ + K++ +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLI 154
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 413 SIKLIKKPFSLYSRWSGFVMNTKSFSSSSKNIEMAVDLMVMQ 288
S+ L+ PF L +R +G+ + FSS S + MAV ++ +Q
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQ 109
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 179 DRRGRSQTCCGYSASCPSSHG 117
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 179 DRRGRSQTCCGYSASCPSSHG 117
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 94 GEFHGRRDPWDDGQEAEYPQHVCDR 168
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 94 GEFHGRRDPWDDGQEAEYPQHVCDR 168
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 534 DAVLFRFVQHTRHTVNNNKGSISDTECS 451
D +F +T+ TV+ KG+ SDTEC+
Sbjct: 367 DMEIFPLCDYTQCTVDVQKGNYSDTECA 394
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 534 DAVLFRFVQHTRHTVNNNKGSISDTECS 451
D +F +T+ TV+ KG+ SDTEC+
Sbjct: 367 DMEIFPLCDYTQCTVDVQKGNYSDTECA 394
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 77 HKPSKMVNFTVDEIRGMMDKKRN-IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAG-E 250
H P K+ DE+ M ++KRN + N A+++ + +S+ S I G A +
Sbjct: 610 HVPEKVAEDIADEVARMTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEGVNATLQ 669
Query: 251 TLSLTRVRTNKTVASPLNLRPSLCSSSLKRKI*YSSQTLTSV 376
T+ RV+ + + ++L L + R+ T+TS+
Sbjct: 670 TIEKQRVQ-QQDGGNLMDLSALLTNQVRNRESAARRPTITSI 710
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 500 DIQSTTTRAPSVTRSAAVTSEEKSTCPGESIK 405
D +T R+P TRS ++TS + C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 491 STTTRAPSVTRSAAVTSEEKSTCPGESIKLIKK 393
+TTT APS T + VT K P E KL+KK
Sbjct: 777 TTTTEAPSTT-TKPVTVAVKKVSPEEMEKLVKK 808
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 518 GLYNTPDIQSTTTRAPSVTRSAAVTSEEKSTCP-GESIKLIKKPFSLYSRWSGFVMNTKS 342
G+ TPD ++TTT P+ T++ + +E+ + G ++ P S+ S SG N+ +
Sbjct: 153 GVPTTPDPKATTTPTPTTTKAQNIIAEDPNGGQLGGGELVVTNPGSVGS-GSGNSGNSSN 211
Query: 341 FSSSSKN 321
++SS N
Sbjct: 212 NNNSSGN 218
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 515 LYNTPDIQSTTT-RAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLYSRWSGFVMNTKSF 339
++ P Q T+T P V AA ++ + E PFS SR V NT S
Sbjct: 29 IFGRPQNQYTSTPHRPEVLNFAAPSATRLAMRRSEQPVTSSTPFSSSSRPMSAVFNTPSL 88
Query: 338 SSS 330
SSS
Sbjct: 89 SSS 91
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 124 DDGQEAEYPQHVCDRPRRSRQVNPH-GLVGFQG--RYHC--WCESRRDPFTDT 267
+D ++P RP + +Q H +V + G RY+ W E +DP DT
Sbjct: 552 NDQHLGKHPNFQKPRPPKGKQAEAHLAIVHYAGTVRYNVKGWLEKNKDPLNDT 604
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 515 LYNTPDIQSTTT-RAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLYSRWSGFVMNTKSF 339
++ P Q T+T P V AA ++ + E PFS SR V NT S
Sbjct: 29 IFGRPQNQYTSTPHRPEVLNFAAPSATRLAMRRSEQPVTSSTPFSSSSRPMSAVFNTPSL 88
Query: 338 SSS 330
SSS
Sbjct: 89 SSS 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,575,470
Number of Sequences: 27780
Number of extensions: 429778
Number of successful extensions: 1407
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -