Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021008
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69637-7|CAO78728.1|  433|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69637-1|CAA93467.1|  601|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and cap...    28   8.6  

>Z69637-7|CAO78728.1|  433|Caenorhabditis elegans Hypothetical
           protein F35G2.1b protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 502 FQNTIY-LRKKKLTSIYLRNSTRVHLI 425
           FQN I  +R K+ TS+ LRNS R  L+
Sbjct: 205 FQNDIRRMRAKRTTSVILRNSERARLV 231


>Z69637-1|CAA93467.1|  601|Caenorhabditis elegans Hypothetical
           protein F35G2.1a protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 502 FQNTIY-LRKKKLTSIYLRNSTRVHLI 425
           FQN I  +R K+ TS+ LRNS R  L+
Sbjct: 373 FQNDIRRMRAKRTTSVILRNSERARLV 399


>AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 4 protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 778 PYVCLIFKTTQRILMRFFLIDRVI 707
           P+V +++K   R LMRFFLI  VI
Sbjct: 531 PFVLMLYKIIIRDLMRFFLIYLVI 554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,762,215
Number of Sequences: 27780
Number of extensions: 335447
Number of successful extensions: 611
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)