Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021007
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 101 1e-22
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 56 5e-09
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 44 3e-05
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.001
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 37 0.003
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.28
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.37
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.85
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 4.5
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 26 4.5
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 4.5
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 26 6.0
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 25 7.9
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 7.9
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 7.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 101 bits (242), Expect = 1e-22
Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AAVSKTAVHPIMRVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
AAVSKTA PI RVKLL+Q Q + + RYKGI + F R E+G++S WRGN AN
Sbjct: 38 AAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTAN 97
Query: 434 VIRYFPTQALNFAFKDKYKQVF 499
V+RYFPTQALNFAFKDK+K++F
Sbjct: 98 VLRYFPTQALNFAFKDKFKKMF 119
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 580 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIF 696
SL FVY LD+ARTRLA D K G+R+F+GL + K +
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTY 186
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 326 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 505
S + ++++ G+VD + + + GL +RG +V+ + L F D K V L
Sbjct: 166 SAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLV 225
Query: 506 G 508
G
Sbjct: 226 G 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 56.0 bits (129), Expect = 5e-09
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 257 AAVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A VS+TAV P+ R+K++ QVQ+ ++ Y + V+I +GL+ F+RGN N
Sbjct: 31 ATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83
Query: 437 IRYFPTQALNFAFKDKYKQ 493
+R FP A+ FA + KQ
Sbjct: 84 LRAFPYGAVQFATFNMLKQ 102
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +2
Query: 251 YPAAVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 430
+ + +T P ++ QV + YK I A I K +G+ F+RG +
Sbjct: 235 FTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSS 291
Query: 431 NVIRYFPTQALNF 469
N+++ P ++ +
Sbjct: 292 NMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 43.6 bits (98), Expect = 3e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 263 VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
V+K+ V P+ RVK+L Q H S + A R+ G+ A I GL ++G+ A + R
Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYR 88
Query: 443 YFPTQALNFAFKDKYKQVFL 502
FP + F ++ ++V +
Sbjct: 89 VFPYAGIKFVAYEQVRRVLI 108
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 37.9 bits (84), Expect = 0.001
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 251 YPAAVSKTAVHPIMRVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRG 421
+P + AV I V L L V Q++ + Y G D +I K +G +RG
Sbjct: 8 FPVTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRG 67
Query: 422 NFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGVTSLV 547
++ P +AL FA D Y +++ R+ SS S++
Sbjct: 68 ILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 592 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKI 693
+YPLD +TR+ VGK D ++G +C+ KI
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKI 55
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 490
+Y G VD F +I K++ +L+ + G A + R+ A F K +
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIR 186
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 272 TAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 451
T V P+ ++ LQ Q S A Y G +D F + K +G ++G N+++ P
Sbjct: 351 TIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407
Query: 452 TQALNFAFKDKYKQ 493
+ A+++ + K+
Sbjct: 408 SVAISYLVYENCKK 421
Score = 29.5 bits (63), Expect = 0.48
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 260 AVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGNFANV 436
+V++ ++P+ +K +Q +S+ Q K I+ + + + K G+ ++RG +
Sbjct: 240 SVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGVLVGI 295
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTRR 520
+ FP A + + K+ ++G L R
Sbjct: 296 LGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 281 HPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 460
H ++R +L S I +Y G++ F + EQG++ + G A+++R P
Sbjct: 293 HEVVRTRL-----RQSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNAC 347
Query: 461 LNF 469
+ F
Sbjct: 348 ILF 350
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 329 KQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
+ ++A + YK + +I + GLL FW G + R + + F +K ++
Sbjct: 232 QSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.85
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 338 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 191 EQNVEPRRSGRVR*GLPGWRYPAAVSKTAVHPIMRVKLLLQVQHVS-KQIAADQR 352
+Q + P+R+G ++ +PG + P A +T + P+M + +Q Q +Q A QR
Sbjct: 509 QQPMVPQRTG-MQPMMPGLQQPMAPQRTGMQPMMPQRTGMQPQMTGFQQPMAPQR 562
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 194 QNVEPRRSGRVR*GLPGWRYPAAVSKTAVHPIMRVKLLLQVQ 319
Q + P+R+G ++ +PG + P A +T + P+M + +Q Q
Sbjct: 615 QPMMPQRTG-MQPQMPGMQQPMAPQRTGMQPMMPQRTGMQPQ 655
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 194 QNVEPRRSGRVR*GLPGWRYPAAVSKTAVHPIMRVKLLLQVQ 319
Q + P+R+G ++ +PG + P A +T + P+M + +Q Q
Sbjct: 681 QPMMPQRTG-MQPQMPGMQQPMAPQRTGMQPMMPQRTGMQPQ 721
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 581 LCASCTPSTSHVPVLPPMSVREMASVNSPVSETASARSS 697
L +S ST HV VLP +EM ++SPV + ++ S+
Sbjct: 39 LTSSTHSSTDHVNVLPISQDKEM-DISSPVKKQKASYSN 76
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 469 RLQGQVQAGVPRRFDKKTQFWRYFXXXXXXXXXXXXTSLCF--VYPLDFART 618
RLQ Q A +P + +FWR F TS+ F P DFA T
Sbjct: 7 RLQPQRFAALPNPVTAENKFWRSFKVPVVAKEYSAITSIHFSAESPYDFAVT 58
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 658 HAGHLPYRHRRQDGYVRSRGGTRSTERWLRRHHRRPDYQRS 536
H P R R +D RS +RS R HR DY RS
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRS 177
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 35 SKKAHTYPLCSRDYEITPNLLFKNQELVFRDHPSACAATPTSTYSPSEDHIIEQNVEPRR 214
SK + T+ S D E T + + + + HP+ T +S++SP++ I E + ++
Sbjct: 39 SKTSLTFRQSSSD-ESTSSYSGNHHNINIQHHPNRPFRTNSSSFSPNDYSISESPSKSKK 97
Query: 215 SG 220
G
Sbjct: 98 DG 99
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 54 TLC--APVITKLLQISCSKIRS*CFVITHPRVPQLPPRHIHLV 176
T+C AP + L ++C+K+ C ++ PR PR+ HL+
Sbjct: 551 TICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLFRNPRN-HLL 592
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,772,303
Number of Sequences: 5004
Number of extensions: 54886
Number of successful extensions: 176
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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