Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021007
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 48 7e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 7e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 42 5e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.010
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.018
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 36 0.024
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.13
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.51
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.68
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.6
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 30 1.6
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.6
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 2.1
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.1
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.7
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.7
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.6
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.6
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.6
SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34515| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 28 6.3
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 96.7 bits (230), Expect = 2e-20
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AAVSKTAVHPIMRVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
A +SKTA PI RVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 434 VIRYFPTQALNFAFKDKYKQVF 499
IRYFPTQALNFAFKD+ K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Frame = +1
Query: 580 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGL 672
SL FVY LD+ RTRLA D VGK G+R+F+G+
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGM 159
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/78 (42%), Positives = 54/78 (69%)
Frame = +2
Query: 260 AVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
AVS+T+V P+ RVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 440 RYFPTQALNFAFKDKYKQ 493
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/98 (38%), Positives = 56/98 (57%)
Frame = +2
Query: 257 AAVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A VS+TA P+ R+K+LLQVQ A+ GIV F + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANV 200
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGVTSLVI 550
I+ P + F +K K++ +G T ++ GVT ++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/79 (24%), Positives = 43/79 (54%)
Frame = +2
Query: 266 SKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
S+T+++P+ +K L ++ + Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 446 FPTQALNFAFKDKYKQVFL 502
P ++ A + K +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 AAVSKTAVHPIMRVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
A +SKTA PI RVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 308 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 472
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +2
Query: 263 VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
++ V+P +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 443 YFP 451
FP
Sbjct: 222 LFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 260 AVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A TAV+PI VK +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 440 RYFPTQALNFAFKDKYKQVF 499
P +A+ D + +F
Sbjct: 983 GVSPEKAIKLTTNDFVRGIF 1002
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 493
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 335 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 499
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 278 VHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
+ P+ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 458 ALNF 469
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 508
YKG +D RI + +G+ + W+G R P L F F ++ + F GG
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 577 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCIS 687
T+ YPLD R+RLA V + G + CIS
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS 113
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 263 VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
++ V+P +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 365 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 490
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 239 PGWRYPAA-----VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 403
P WR+ + V+ + HP+ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 404 LSFWRGNFANVIRYFP 451
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 263 VSKTAVHPIMRVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
+SK + P +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 281 HPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 460
+P+ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 376 YPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGV 535
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 275 AVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
A P+ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+
Sbjct: 37 AGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPS 95
Query: 455 QALNF 469
AL F
Sbjct: 96 TALTF 100
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 266 SKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
+ AV+P+ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 446 FP 451
P
Sbjct: 276 AP 277
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 359 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 305 LLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
L++++ + +I YK + AF +I K++G L W G
Sbjct: 137 LVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTG 175
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRTSNHACQAAAPSTARQQADRRRPALQ 357
RT+ R + R R + V+RRR DRR + A T R+Q DRRR Q
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRR------RTRARVTRRRQVDRRRTRAQ 164
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 671 RPENSRWPSPLPTSAARRVRAKSRGYTK 588
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 610 RSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 512
RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 13 RSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGG 508
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGG 85
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 552 QITSEVTPELRLLVKPPRNTCLYLSLKA 469
Q+T V E RLL KP R+ C YLS A
Sbjct: 133 QVTGIVDAEARLL-KPGRSECFYLSFSA 159
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 625 QDGYVRSRGGTRSTERWLRRHHRRPDY-QRSNARTASS 515
QDG V +RG TR + R H RR + R + R +S+
Sbjct: 591 QDGQVTTRGHTRRSSNTTRSHTRRSSHTTRGHTRRSSN 628
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 386 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_34515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 122 RDHPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGW 247
RDH CA P ST + S+ ++ + P + PGW
Sbjct: 255 RDHHRVCATLPESTDASSQTDLVLLRIVPCQDVEFVGAPPGW 296
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +2
Query: 593 CTPSTSHVPVLP--PMSVREMASVNSP 667
CTPS+S P LP P S E S+N+P
Sbjct: 942 CTPSSSTAPPLPTNPKSPSEAPSLNNP 968
>SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 1704
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 125 DHPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGWRYPAAVSKT 274
+H A +A + +P ++ I +Q G+PG++YP ++ T
Sbjct: 1210 EHSQAASAQDMTQITPVDEAIAQQRTPAMEPLYQAAGMPGYQYPTSIQYT 1259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,218,303
Number of Sequences: 59808
Number of extensions: 478978
Number of successful extensions: 1612
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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