Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021006
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    24   4.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.3  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   8.3  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 315 VLPMLVQKVWPSTLEEPKPLHM 380
           V+P +++K  P T+E+P P+ +
Sbjct: 215 VIPKVIEKPVPYTVEKPYPIEV 236


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 391 VLHHMCKGLGSSKVLGQTFWTSM 323
           V+ H+  G+    +LG T W  M
Sbjct: 678 VVRHVTAGVPQGSILGPTLWNIM 700


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 596 ENISTICIS*HFNFPIIMVVMNHWAV 519
           E ++  CIS  FNF  + V +  W V
Sbjct: 515 EALNQFCISNDFNFLTVRVYVGCWLV 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,820
Number of Sequences: 2352
Number of extensions: 16228
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)