Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021003
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         30   0.069
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         30   0.069
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    27   0.64 
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    24   4.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   6.0  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.0  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.0  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   7.9  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   7.9  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 0.069
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 89  PYSQHASHPSDHSLIYHDAY 148
           PY QH  HP+ H  + H AY
Sbjct: 173 PYPQHVLHPAHHPALLHPAY 192


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 0.069
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 89  PYSQHASHPSDHSLIYHDAY 148
           PY QH  HP+ H  + H AY
Sbjct: 173 PYPQHVLHPAHHPALLHPAY 192


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
          protein AgamOBP53 protein.
          Length = 171

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 24 AMWGALEMYCPHHCQMWKLVP 86
          A+W  L+   PH CQM +L+P
Sbjct: 20 ALWLFLKFEVPHCCQMEELIP 40


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 210 LVGNRLICCPSSVFRLRLCHHHFDGNWLSVLLASNPCLDC 329
           + GNRLI   SSV +     H +DG+  +       C  C
Sbjct: 255 IFGNRLIEESSSVMKAAYSCHWYDGSEEAKTFVQIVCQQC 294


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 245 CLQTSTLPSPF*RQ 286
           CL+T+T P+P+ RQ
Sbjct: 526 CLETATFPAPWKRQ 539


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  TLNMLHILVTTA*YTMMXMWVR--WLQWVPWL 182
           T+ +L+    TA    M  W++  +LQW+PW+
Sbjct: 312 TVVVLNYHHRTADIHEMPPWIKSVFLQWLPWI 343


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  TLNMLHILVTTA*YTMMXMWVR--WLQWVPWL 182
           T+ +L+    TA    M  W++  +LQW+PW+
Sbjct: 312 TVVVLNYHHRTADIHEMPPWIKSVFLQWLPWI 343


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 210 LVGNRLICCPSSVFRLRLCHHHFDGNWLSVLLASNPCLDC 329
           + GNRLI   SSV       H +DG+  +       C  C
Sbjct: 402 IFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQC 441


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 210 LVGNRLICCPSSVFRLRLCHHHFDGNWLSVLLASNPCLDC 329
           + GNRLI   SSV       H +DG+  +       C  C
Sbjct: 402 IFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQC 441


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,059
Number of Sequences: 2352
Number of extensions: 10438
Number of successful extensions: 42
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)