Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021003
(617 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061575-1|AAL29123.1| 428|Drosophila melanogaster SD02746p pro... 83 3e-16
AE013599-703|AAM68833.2| 428|Drosophila melanogaster CG14767-PA... 83 3e-16
AF317419-1|AAK69597.1| 432|Drosophila melanogaster lysosomal-as... 80 2e-15
AE013599-705|AAF59049.3| 432|Drosophila melanogaster CG14767-PC... 80 2e-15
AE013599-704|AAF59050.2| 432|Drosophila melanogaster CG14767-PB... 80 2e-15
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ... 29 3.8
U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ... 29 3.8
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA... 29 3.8
AE014298-2696|AAF48822.1| 116|Drosophila melanogaster CG15061-P... 29 6.6
>AY061575-1|AAL29123.1| 428|Drosophila melanogaster SD02746p
protein.
Length = 428
Score = 83.0 bits (196), Expect = 3e-16
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +2
Query: 29 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDAYVGAMVTVGTMALTLIMIYGA 208
V + LPTPLS VE PY+ DHSL Y + +G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYAYR-----DHSLNYQNFDMGGLVCTCMIAITLMMIYGT 141
Query: 209 ARGKPAYLLPFFCLQTSTLP-SPF*RQLAIC-VTCVKSMP*LRRPVAFPSAKCCCGCPAS 382
+GKP++LLPFFCLQ + +C + + S+ + P + P
Sbjct: 142 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSI--IAESHRLPWREKLLELPPE 199
Query: 383 XXXXXXXXXXXXXXXXKGYCISVVWRCYKYLTMR 484
K YCI +VWRCYKYLT+R
Sbjct: 200 ELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLR 233
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 268 ITILTATGYLCYLRQIHALIAETRRVPFRE 357
IT LTA GYLCYL+ IH++IAE+ R+P+RE
Sbjct: 162 ITTLTAAGYLCYLQAIHSIIAESHRLPWRE 191
>AE013599-703|AAM68833.2| 428|Drosophila melanogaster CG14767-PA,
isoform A protein.
Length = 428
Score = 83.0 bits (196), Expect = 3e-16
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +2
Query: 29 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDAYVGAMVTVGTMALTLIMIYGA 208
V + LPTPLS VE PY+ DHSL Y + +G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYAYR-----DHSLNYQNFDMGGLVCTCMIAITLMMIYGT 141
Query: 209 ARGKPAYLLPFFCLQTSTLP-SPF*RQLAIC-VTCVKSMP*LRRPVAFPSAKCCCGCPAS 382
+GKP++LLPFFCLQ + +C + + S+ + P + P
Sbjct: 142 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSI--IAESHRLPWREKLLELPPE 199
Query: 383 XXXXXXXXXXXXXXXXKGYCISVVWRCYKYLTMR 484
K YCI +VWRCYKYLT+R
Sbjct: 200 ELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLR 233
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 268 ITILTATGYLCYLRQIHALIAETRRVPFRE 357
IT LTA GYLCYL+ IH++IAE+ R+P+RE
Sbjct: 162 ITTLTAAGYLCYLQAIHSIIAESHRLPWRE 191
>AF317419-1|AAK69597.1| 432|Drosophila melanogaster
lysosomal-associated transmembraneprotein protein.
Length = 432
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +2
Query: 29 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDAYVGAMVTVGTMALTLIMIYGA 208
V + LPTPLS VE PY+ + H ++ Y + +G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGT 145
Query: 209 ARGKPAYLLPFFCLQTSTLP-SPF*RQLAIC-VTCVKSMP*LRRPVAFPSAKCCCGCPAS 382
+GKP++LLPFFCLQ + +C + + S+ + P + P
Sbjct: 146 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSI--IAESHRLPWREKLLELPPE 203
Query: 383 XXXXXXXXXXXXXXXXKGYCISVVWRCYKYLTMR 484
K YCI +VWRCYKYLT+R
Sbjct: 204 ELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLR 237
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 268 ITILTATGYLCYLRQIHALIAETRRVPFRE 357
IT LTA GYLCYL+ IH++IAE+ R+P+RE
Sbjct: 166 ITTLTAAGYLCYLQAIHSIIAESHRLPWRE 195
>AE013599-705|AAF59049.3| 432|Drosophila melanogaster CG14767-PC,
isoform C protein.
Length = 432
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +2
Query: 29 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDAYVGAMVTVGTMALTLIMIYGA 208
V + LPTPLS VE PY+ + H ++ Y + +G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGT 145
Query: 209 ARGKPAYLLPFFCLQTSTLP-SPF*RQLAIC-VTCVKSMP*LRRPVAFPSAKCCCGCPAS 382
+GKP++LLPFFCLQ + +C + + S+ + P + P
Sbjct: 146 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSI--IAESHRLPWREKLLELPPE 203
Query: 383 XXXXXXXXXXXXXXXXKGYCISVVWRCYKYLTMR 484
K YCI +VWRCYKYLT+R
Sbjct: 204 ELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLR 237
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 268 ITILTATGYLCYLRQIHALIAETRRVPFRE 357
IT LTA GYLCYL+ IH++IAE+ R+P+RE
Sbjct: 166 ITTLTAAGYLCYLQAIHSIIAESHRLPWRE 195
>AE013599-704|AAF59050.2| 432|Drosophila melanogaster CG14767-PB,
isoform B protein.
Length = 432
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +2
Query: 29 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDAYVGAMVTVGTMALTLIMIYGA 208
V + LPTPLS VE PY+ + H ++ Y + +G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGT 145
Query: 209 ARGKPAYLLPFFCLQTSTLP-SPF*RQLAIC-VTCVKSMP*LRRPVAFPSAKCCCGCPAS 382
+GKP++LLPFFCLQ + +C + + S+ + P + P
Sbjct: 146 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSI--IAESHRLPWREKLLELPPE 203
Query: 383 XXXXXXXXXXXXXXXXKGYCISVVWRCYKYLTMR 484
K YCI +VWRCYKYLT+R
Sbjct: 204 ELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLR 237
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 268 ITILTATGYLCYLRQIHALIAETRRVPFRE 357
IT LTA GYLCYL+ IH++IAE+ R+P+RE
Sbjct: 166 ITTLTAAGYLCYLQAIHSIIAESHRLPWRE 195
>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
variegation protein3-7 protein.
Length = 1169
Score = 29.5 bits (63), Expect = 3.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 150 WVRWLQWVPWL 182
W+RWL+W PWL
Sbjct: 216 WLRWLRWHPWL 226
>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
protein protein.
Length = 1106
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 231 CCPSSVFRLRLCHHHFDGNWLSVLLASNPCLDCG 332
C P +F +LCH + D W + S P CG
Sbjct: 804 CPPCMIFTTKLCHGNHD--WRKTIPCSQPNFSCG 835
>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
protein.
Length = 1250
Score = 29.5 bits (63), Expect = 3.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 150 WVRWLQWVPWL 182
W+RWL+W PWL
Sbjct: 297 WLRWLRWHPWL 307
>AE014298-2696|AAF48822.1| 116|Drosophila melanogaster CG15061-PA
protein.
Length = 116
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +1
Query: 4 IPSEFMEQCGAHWRCT---AHTTVKCGNSSQPIL----STCF 108
I S +++CG HW CT VK + + P L STCF
Sbjct: 68 INSPVVQRCGGHWACTPLGMSMIVKISSQAAPSLAGDSSTCF 109
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,924,040
Number of Sequences: 53049
Number of extensions: 462565
Number of successful extensions: 1612
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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