Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG2002
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 198 3e-51
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 163 9e-41
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 91 3e-31
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 91 1e-30
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 127 7e-30
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 123 1e-28
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 123 2e-28
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 123 2e-28
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 122 4e-28
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 120 1e-27
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 120 1e-27
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 120 1e-27
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 119 2e-27
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 117 1e-26
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 116 2e-26
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 109 2e-24
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 105 2e-23
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 97 2e-20
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 63 1e-19
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 93 2e-19
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 80 2e-15
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 29 3.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical pr... 28 6.0
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 7.9
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 7.9
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 7.9
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 7.9
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 7.9
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 7.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 7.9
AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine re... 28 7.9
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 198 bits (483), Expect = 3e-51
Identities = 94/160 (58%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Frame = +2
Query: 260 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 439
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 440 KYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 619
+YDS+ S TY +G + AIQYG+GS+ GF+S D V V G+ Q FAEA SEPG+ FVA
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVA 196
Query: 620 AKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFY 736
AKFDGILGMA+ IAV V PVF+ + Q V +FSF+
Sbjct: 197 AKFDGILGMAYPEIAVLGVQPVFNTLFEQKKVPSNLFSFW 236
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 163 bits (397), Expect = 9e-41
Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 12/214 (5%)
Frame = +2
Query: 131 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLS 292
+F L + + A+ R+ L + R + + G+ E L+ KY V G P E LS
Sbjct: 5 VFLLLALVALASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLS 62
Query: 293 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 472
+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS +
Sbjct: 63 DYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCT 122
Query: 473 ANGTQFAIQYGSGSLSGFLSTDDVTVGG----LKVRRQTFAEAVSEPGLAFVAAKFDGIL 640
A G F IQYG+GS+ G + D V G + Q A A SEPG+ FVAAKFDGI
Sbjct: 123 ATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIF 182
Query: 641 GMAFSTIAVDHVTPVFDNMVAQGLV--QPVFSFY 736
GM + TI+V+ ++ D + A + +F+F+
Sbjct: 183 GMGWDTISVNKISQPMDQIFANSAICKNQLFAFW 216
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 91.1 bits (216), Expect(2) = 3e-31
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Frame = +2
Query: 407 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 571
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 402
Query: 572 QTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLVQ-PVFSFY 736
F +A S F DGILG+AF +IAVD +TP F N + Q LV P+F+ +
Sbjct: 403 TVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVF 457
Score = 62.5 bits (145), Expect(2) = 3e-31
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Frame = +2
Query: 104 LKTTMGKISLFFL-ALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYD 262
+K G +LF L AL+A+++ A+ +VPL +++ R G + E+ R +
Sbjct: 201 IKIISGMQNLFLLLALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMN 260
Query: 263 VTGPSP---EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 406
+ +++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 261 KQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +2
Query: 446 DSRKSKTYVANGTQF--AIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 619
D +S Y A + A YGS S SG L D V+ GG+ + + V A
Sbjct: 21 DQLRSDAYAAGVDDYEHAGYYGSDSASGILGFDTVSFGGISESQLIVPDTV-----VATA 75
Query: 620 AKFDGILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFY 736
DGI+G+ F + ++ P F N V Q LV P+F Y
Sbjct: 76 EDIDGIMGLGFLANSQQNIYPPFVNAVGQKLVDPIFHVY 114
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 91.1 bits (216), Expect(2) = 1e-30
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Frame = +2
Query: 407 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 571
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 196
Query: 572 QTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLVQ-PVFSFY 736
F +A S F DGILG+AF +IAVD +TP F N + Q LV P+F+ +
Sbjct: 197 TVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVF 251
Score = 60.1 bits (139), Expect(2) = 1e-30
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYDVTGPSP---EPLS 292
LAL+A+++ A+ +VPL +++ R G + E+ R + + ++
Sbjct: 8 LALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMNKQSNDMSVGQYVN 67
Query: 293 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 406
+Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 68 DYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 127 bits (307), Expect = 7e-30
Identities = 80/209 (38%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 307
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 308 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQ 487
Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS T+ ANG
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKSSTFKANGKP 123
Query: 488 FAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 652
+ IQYGSG+ G+L D V G L V TF A + F GILG+AF
Sbjct: 124 WQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAGGILGLAF 182
Query: 653 STIAVDHVTPVFDNMVAQGLV-QPVFSFY 736
+++AVDHV P N + QGL+ QP+F+ +
Sbjct: 183 TSLAVDHVVPPLINAINQGLLDQPLFTVW 211
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 123 bits (297), Expect = 1e-28
Identities = 70/160 (43%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Frame = +2
Query: 275 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 454
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 455 KSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVA 619
KS T+ ANG + IQYGSG+ G+L D V G L V TF A + F
Sbjct: 118 KSSTFKANGKPWQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKN 176
Query: 620 AKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFY 736
+GILG+AF+++AVDHV P N + QGL+ QP+F+ +
Sbjct: 177 DAAEGILGLAFTSLAVDHVVPPLINAINQGLLDQPLFTVW 216
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 123 bits (296), Expect = 2e-28
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 5/204 (2%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 319
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 320 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 487
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 488 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 667
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++V
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSV 183
Query: 668 DHVTPVFDNMVAQG-LVQPVFSFY 736
D VTP N+V+Q L P+F+ +
Sbjct: 184 DQVTPPMQNLVSQNQLDAPIFTIF 207
Score = 87.8 bits (208), Expect = 7e-18
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Frame = +2
Query: 302 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 472
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 473 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 652
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 653 STIAVDHVTPVFDNMVAQG-LVQPVFSFY 736
++VD VTP +++Q L P+F+ +
Sbjct: 568 PALSVDQVTPPMQKLISQNQLDAPMFTIW 596
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 123 bits (296), Expect = 2e-28
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 5/204 (2%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 319
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 320 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 487
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 488 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 667
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++V
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSV 183
Query: 668 DHVTPVFDNMVAQG-LVQPVFSFY 736
D VTP N+V+Q L P+F+ +
Sbjct: 184 DQVTPPMQNLVSQNQLDAPIFTIF 207
Score = 87.8 bits (208), Expect = 7e-18
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Frame = +2
Query: 302 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 472
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 473 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 652
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 653 STIAVDHVTPVFDNMVAQG-LVQPVFSFY 736
++VD VTP +++Q L P+F+ +
Sbjct: 568 PALSVDQVTPPMQKLISQNQLDAPMFTIW 596
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 122 bits (293), Expect = 4e-28
Identities = 71/159 (44%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Frame = +2
Query: 278 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 457
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 458 SKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAA 622
S T+V NG + IQYGSG +G L D V G L V TF A S+ F
Sbjct: 117 SSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKISADFKND 175
Query: 623 KFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFY 736
DGILG+AF+++AVD V P N + QG++ QP+FS +
Sbjct: 176 ATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVW 214
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 120 bits (289), Expect = 1e-27
Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 307
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 308 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 472
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 473 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 652
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 653 STIAVDHVTPVFDNMVAQ-GLVQPVFSFY 736
+AVD V P N++AQ L P+F+ +
Sbjct: 186 PALAVDQVVPPMQNLIAQKQLDAPLFTVW 214
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 120 bits (289), Expect = 1e-27
Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 307
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 308 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 472
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 473 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 652
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 653 STIAVDHVTPVFDNMVAQ-GLVQPVFSFY 736
+AVD V P N++AQ L P+F+ +
Sbjct: 186 PALAVDQVVPPMQNLIAQKQLDAPLFTVW 214
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 120 bits (289), Expect = 1e-27
Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 307
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 308 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 472
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 473 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 652
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 653 STIAVDHVTPVFDNMVAQ-GLVQPVFSFY 736
+AVD V P N++AQ L P+F+ +
Sbjct: 186 PALAVDQVVPPMQNLIAQKQLDAPLFTVW 214
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 119 bits (287), Expect = 2e-27
Identities = 75/216 (34%), Positives = 113/216 (52%), Gaps = 9/216 (4%)
Frame = +2
Query: 116 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT-GPSPEPLS 292
M I L FLA S+ A++++P + R G E L ++ +P+S
Sbjct: 1 MHLIFLLFLAPFCSA--AVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQPIS 58
Query: 293 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHNKYDS 451
+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C K+D+
Sbjct: 59 DYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCD--NMFCNGWIGSNYTRQKFDT 116
Query: 452 RKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTV-GGLKVRRQTFAEAVSEPGLAFVAAKF 628
KS ++ +F+IQYG G SG+L TD V + GGL +R+Q A ++ + F
Sbjct: 117 SKSSSFSRENRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFAVQPM 175
Query: 629 DGILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFY 736
DGI G+A+ +AVD +TP N+++Q L PVFS +
Sbjct: 176 DGIFGLAWPALAVDQITPPMQNLISQ-LDVPVFSVW 210
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 117 bits (281), Expect = 1e-26
Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Frame = +2
Query: 131 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT----GPSPEPLSNY 298
+F L L+ A+ ++P + R + G E L ++ +PL +Y
Sbjct: 4 VFLLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPLIDY 63
Query: 299 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSK 463
D Y I++GTPPQ VV DT S+NLWV S+ C+ + K++ KS
Sbjct: 64 YDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSS 123
Query: 464 TYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILG 643
T+V +F+IQYGSG+ SG+L TD + +GGL V+ Q F A + G + DGI G
Sbjct: 124 TFVKGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGSEPMDGIFG 182
Query: 644 MAFSTIAVDHVTPVFDNMVAQ-GLVQPVFSFY 736
+ + I+VD VTP N+++Q L P+FS +
Sbjct: 183 LGWPAISVDQVTPPMQNLISQKQLDAPLFSIW 214
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 116 bits (280), Expect = 1e-26
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 6/164 (3%)
Frame = +2
Query: 263 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 442
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 443 YDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGL 607
+DS KS T+ NG + IQY SGS G + D V GG L V TF A S
Sbjct: 114 FDSSKSTTFKKNGQSWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHISS 172
Query: 608 AFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFY 736
F +GILG+AF+++AVD VTP N + + ++ QP+F+ +
Sbjct: 173 NFKNDAAEGILGLAFTSLAVDGVTPPLINAINKKILDQPLFTVF 216
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 116 bits (278), Expect = 2e-26
Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Frame = +2
Query: 134 FFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYL 301
F L+ + + A+ +VP H+ ++ R + G L ++ +P +Y
Sbjct: 4 FVLSPLWACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYF 63
Query: 302 DAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKT 466
D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T
Sbjct: 64 DDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTT 123
Query: 467 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 646
+V +F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+
Sbjct: 124 FVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGL 182
Query: 647 AFSTIAVDHVTPVFDNMVAQ-GLVQPVFSFY 736
++ +AVD V P N++AQ L P+F+ +
Sbjct: 183 GWTALAVDQVVPPMQNLIAQKQLDAPLFTVW 213
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 109 bits (263), Expect = 2e-24
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 10/171 (5%)
Frame = +2
Query: 254 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 418
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 419 --IACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGG--LKVRRQTFAE 586
AC KY S +Y +GT F+I YG+GS SG+ D + L ++ Q F +
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISYGTGSASGYFGKDTLCFSDTTLCIKSQIFGQ 166
Query: 587 AVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFY 736
A + F + DGILG+ F+ +AV V P F N V QGLV +P+F+ Y
Sbjct: 167 A-NNIAPFFANQEIDGILGLGFTDLAVHSVPPPFVNAVEQGLVDEPIFTVY 216
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 105 bits (253), Expect = 2e-23
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 8/215 (3%)
Frame = +2
Query: 116 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKY-DVTGPSPEPLS 292
M I L F+A S+ A+ ++P + R + G E L ++ PL+
Sbjct: 1 MHLIFLLFIATFCSA--AVLQLPTKSTGSLRAKLIQSGKYPEFLASQHVSRLNSGALPLA 58
Query: 293 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--KYDS 451
+Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K+ S
Sbjct: 59 DYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLKFYS 116
Query: 452 RKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFD 631
KS ++V +F I Y +G+ SG+L TD + +GGL V+ Q FA ++ D
Sbjct: 117 NKSSSFVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLD 175
Query: 632 GILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFY 736
G+LG+A+ +AVD +TP N++ Q L P+F+ +
Sbjct: 176 GVLGLAWPPVAVDQITPPMQNLMPQ-LDAPIFTLW 209
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 96.7 bits (230), Expect = 2e-20
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Frame = +2
Query: 290 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 469
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S TY
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 470 VANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDG 634
+A + I+Y SG G L D V +GG L + R ++ G F + +G
Sbjct: 122 IATNRPWQIKYASGDAYGTLGIDTVKIGGSGEAQLAIPR-SYLGVADTVGSDFKWSPKEG 180
Query: 635 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFS 730
I G+AF+ +AVD++TP N + QGL+ QP+F+
Sbjct: 181 IFGLAFTALAVDNITPPIINAINQGLLDQPLFT 213
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 62.9 bits (146), Expect(2) = 1e-19
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +2
Query: 413 TNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKV--RRQTFAE 586
T AC ++++S S +YV NG +F + Y +G + GF D V Q F +
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTFCFTNTSVCATGQVFGQ 203
Query: 587 AVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFY 736
A + G AF DGI+G+ + +AV+ TP N++ QG L QP F Y
Sbjct: 204 ATT-IGEAFAKQPEDGIIGLGWPALAVNQQTPPLFNLMNQGKLDQPYFVVY 253
Score = 51.6 bits (118), Expect(2) = 1e-19
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 173 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 349
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 350 FKVVFDTGSSNLWVPSKKC 406
F + D+GSSNLWVP C
Sbjct: 85 FVLFIDSGSSNLWVPDITC 103
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 92.7 bits (220), Expect = 2e-19
Identities = 60/199 (30%), Positives = 95/199 (47%)
Frame = +2
Query: 140 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 319
LAL+ + + L + R G EL RL+ TG E + ++ D Y
Sbjct: 9 LALLVFCSAGQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTV 64
Query: 320 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQFAIQ 499
+ IGTP Q F+V DT SSNLWV +C + +Y+ S T++A + F +
Sbjct: 65 SVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTASSTFIAGTSNFVLP 124
Query: 500 YGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 679
+ G +SG L D++ G K++ Q F L+ V FDG+LG+ + A++ +
Sbjct: 125 FNDGDVSGDLGKDNIQFAGSKIQNQDFGIGTDATRLSGVT--FDGVLGLGWPATALNGTS 182
Query: 680 PVFDNMVAQGLVQPVFSFY 736
N++ Q L QP+F+ Y
Sbjct: 183 TTMQNLLPQ-LDQPLFTTY 200
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 79.8 bits (188), Expect = 2e-15
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Frame = +2
Query: 119 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTE-LELLRLKYDVTGPSPEPLSN 295
GK+ + L L+A + + + + + R G EL R++ TG +
Sbjct: 91 GKL-ISLLGLVALCSAGQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVS--FFD 147
Query: 296 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSKT 466
+ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S T
Sbjct: 148 HFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASST 207
Query: 467 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 646
+VA + F + Y G +SG + D G ++ Q F + FDG+LG+
Sbjct: 208 FVAGTSSFNLPYDGGHVSGNVGKDTAQFAGFTIQSQDF--GIGTAATRLFGETFDGVLGL 265
Query: 647 AFSTIAVDHVTPVFDNMVAQGLVQPVFSFY 736
+ A++ + N++ Q L Q +F+ Y
Sbjct: 266 GWPATALNGTSTTMQNLLPQ-LDQKLFTTY 294
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 515 GCRSRTVSRTGCHSRRTSWTCGCRTCCAANKRCWCS 408
GC GC R C CR CC + C C+
Sbjct: 74 GCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCT 109
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = -3
Query: 715 HESLSHHVVEHRGHMVHCDSAEGHPEDPVELGGHEGKPGLRHG---LGERLAPHLEPAH 548
H HH H GH A H E G H G G H G H PAH
Sbjct: 457 HHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = -3
Query: 721 GLHESLSH--HVVEHRGHMVHCDSAEGHPEDPVELGGHEGKPGLRHGLGERLAPHLE--P 554
G HES H H H GH H + H G H G HG APH E
Sbjct: 588 GHHESHGHGHHAPAHHGH--HGEHGVHHGHHGAGYGAHHGH----HGAHHHHAPHHEHHE 641
Query: 553 AHGD 542
HGD
Sbjct: 642 HHGD 645
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = -3
Query: 715 HESLSHHVVEHRGHMVHCDSAEGHPED----PVELGGHEGKPGLRHGLGERLAPHLEPAH 548
H HH H GH + GH + P GH G+ G HG H PAH
Sbjct: 505 HHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAH-HGHHGEHGTHHG---HHGSHHSPAH 560
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 495 IANWVPFATYVLDLRLSYLLCSKQ 424
+ NW F T L +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 395 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 237
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 485 GCHSRRTSWTCGCRTCCAANKRCWCS 408
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 500 YGSGSLSGFLSTDDVTVGGLKVRRQTF 580
Y GSL GFL DDV L +RQ F
Sbjct: 53 YPDGSLEGFLDIDDVQKKKLDEQRQEF 79
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 485 GCHSRRTSWTCGCRTCCAANKRCWCS 408
GC R C CR CC + C C+
Sbjct: 83 GCCCCRPRCCCCCRRCCTCCRTCCCT 108
>Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical
protein C05C10.3 protein.
Length = 521
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +2
Query: 332 GTPPQSFKVVFDTGSSNLWVPSKKCHYTN--IACLLHNKYDSRKSKTYVANGTQFAIQYG 505
G P + + TG L S N + LL + + +YV +FA QY
Sbjct: 65 GIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGENGEFARQYL 124
Query: 506 SGSL 517
SG L
Sbjct: 125 SGEL 128
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 485 GCHSRRTSWTCGCRTCCAANKRCWCS 408
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPRCCCCCRRCCTCCRTCCCT 109
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 485 GCHSRRTSWTCGCRTCCAANKRCWCS 408
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 464 SWTCGCRTCCAANKRCWCSGTF 399
S CG CA NKRC C T+
Sbjct: 29 STDCGTGNYCAGNKRCACLTTY 50
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 642 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 511
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 642 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 511
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 642 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 511
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 642 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 511
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 642 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 511
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 512 CRSRTVSRTGCHSRRTSWTCGC-RTCCAANKRCWCS 408
C S+ RT C S + CGC R CC C+
Sbjct: 159 CGSQPYGRTPCRSGCPNGDCGCGRPCCYYQNPTCCN 194
>AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 3 protein.
Length = 344
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -2
Query: 434 AANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKGQSHRI 255
A N CW + TF A I C P R+ +L+S + + +TM SH+
Sbjct: 192 AGNMSCWSAATF-SAIVYMTIPC-FPIYGVIVFFRHKTLKSLDGRGRITMSETTRSSHKQ 249
Query: 254 LISTAPVQ 231
LI +Q
Sbjct: 250 LIKALTIQ 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,154,329
Number of Sequences: 27780
Number of extensions: 366515
Number of successful extensions: 1311
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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