Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1944
(701 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 79 5e-17
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 34 0.001
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 23 2.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.5
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.5
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.6
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 8.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 8.6
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 78.6 bits (185), Expect = 5e-17
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +3
Query: 102 EFLRNLLFDPKYCPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYH 281
EFL LL D +YCP IKW + G F+ V V++LWG K +M +E RA+RY+
Sbjct: 462 EFLLKLLQDREYCPRYIKWTNRERGVFKLVDSKAVSRLWGLHKNKPDMNYETMGRALRYY 521
Query: 282 YRQSVLVSVPTARLVYQFGPKGPDI 356
Y++ +L V RLVYQF DI
Sbjct: 522 YQRGILAKVDGQRLVYQFVDVPKDI 546
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 34.3 bits (75), Expect = 0.001
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 369 PNFIKVKSENEQENYNCVLNC*RYFREVLSNIDVVYR*NKSTNFIEFQTLG 521
PNF SE N L C R+ EV+S+ D + NK + I+ +T+G
Sbjct: 795 PNFADFYSEESINNQG--LECLRFLNEVISDFDAILDQNKFKDIIKIKTIG 843
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 337 DRRAPT*RRTIQTSSKSNQKMNKKTITAF 423
D+RAPT + +Q K++ +N + F
Sbjct: 27 DKRAPTGHQEMQGKEKNSASLNSENFGIF 55
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 360 TDNPNFIKVKSENEQENYN 416
TD+ ++ + K E ENYN
Sbjct: 171 TDSRHYDRYKEEESNENYN 189
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 315 ARLVYQFGPKGPDIKTDNP 371
A ++QF P+ PD+ NP
Sbjct: 181 AYYLHQFAPEQPDLNYYNP 199
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 111 RNLLFDPKYCPSIIKW 158
R +L DPK P +I W
Sbjct: 201 RGMLPDPKKTPFLISW 216
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 111 RNLLFDPKYCPSIIKW 158
R +L DPK P +I W
Sbjct: 201 RGMLPDPKKTPFLISW 216
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 315 ARLVYQFGPKGPDIKTDNP 371
A ++QF P+ PD+ NP
Sbjct: 181 AYYLHQFAPEQPDLNYYNP 199
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 164 VFPFDDGRAVFGIE 123
+FPFDD F IE
Sbjct: 192 IFPFDDPLCSFAIE 205
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 164 VFPFDDGRAVFGIE 123
+FPFDD F IE
Sbjct: 192 IFPFDDPLCSFAIE 205
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 164 VFPFDDGRAVFGIE 123
+FPFDD F IE
Sbjct: 243 IFPFDDPLCSFAIE 256
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 164 VFPFDDGRAVFGIE 123
+FPFDD F IE
Sbjct: 192 IFPFDDPLCSFAIE 205
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 649 IISRNLNWRVTVFEDSNRNWCISKREYQYINI 554
I S + N++ + + + N N+ + ++ QY NI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 93 SVPEFLRNLLFDPKYCPSIIKWEDYALGKFRFVKP 197
++P FL +L YC S++ YA F KP
Sbjct: 403 AIPAFLSSLFLWLGYCNSLLNPIIYATLNRDFRKP 437
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +3
Query: 552 LILIYWYSRLLMHQFRFESS 611
+++IY+YS+++ H E +
Sbjct: 225 ILIIYYYSQIVSHVVNHEKA 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,724
Number of Sequences: 438
Number of extensions: 4040
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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