Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1921
         (584 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   3.9  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   5.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   5.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   5.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   5.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.1  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   8.9  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   8.9  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   8.9  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   8.9  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   8.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.9  

>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 90  ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNNE 227
           E +RDR ER R    + I    + Y   N+  +   +LC  +++ E
Sbjct: 65  ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINHIE 110


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 81  SWSESNRDRRERLR 122
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 81  SWSESNRDRRERLR 122
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 81  SWSESNRDRRERLR 122
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 81  SWSESNRDRRERLR 122
           +W E +RDR ER R
Sbjct: 62  TWKERSRDRTERER 75


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 177 HLGSYECKLCLTLHNNEGSY 236
           H+  Y   + + LHN EG++
Sbjct: 274 HVPEYSSSIIMELHNIEGTH 293


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 177 HLGSYECKLCLTLHNNEGSY 236
           H+  Y   + + LHN EG++
Sbjct: 289 HVPEYSSSIIMELHNIEGTH 308


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 90  ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLH 218
           E +RDR ER R    + I    + Y   N+  +   +LC  ++
Sbjct: 65  ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNIN 107


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 90  ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLH 218
           E +RDR ER R    + I    + Y   N+  +   +LC  ++
Sbjct: 65  ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNIN 107


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 90  ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLH 218
           E +RDR ER R    + I    + Y   N+  +   +LC  ++
Sbjct: 65  ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNIN 107


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 90  ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLH 218
           E +RDR ER R    + I    + Y   N+  +   +LC  ++
Sbjct: 65  ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNIN 107


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 90  ESNRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLH 218
           E +RDR ER R    + I    + Y   N+  +   +LC  ++
Sbjct: 65  ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNIN 107


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 512 RLNLLFISRHKSMSRYNTLCNLW 444
           RLNL+F+S     S  +TL   W
Sbjct: 484 RLNLIFMSSSLQWSSTHTLDVAW 506


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 512 RLNLLFISRHKSMSRYNTLCNLW 444
           RLNL+F+S     S  +TL   W
Sbjct: 522 RLNLIFMSSSLQWSSTHTLDVAW 544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,988
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)