Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1892
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   261   4e-72
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  261 bits (640), Expect = 4e-72
 Identities = 125/218 (57%), Positives = 163/218 (74%)
 Frame = +2

Query: 29  SHVHIDKATEYKFFKPWLGEGLLISSGPKWRSHRKMIAPTFHINILKSFVGIFNQNSNNV 208
           S+V+IDK+TEY+FFKPWLG+GLLIS+G KWR+HRK+IAPTFH+N+LKSF+ +FN N+ +V
Sbjct: 105 SNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNANARSV 164

Query: 209 VEKLKSEVGKTFDVHDYMSGTTVDILLETAMGISRKTQDESGFDYAMAVMKMCDIIHQRH 388
           VEK++ E GK FD H+YMS  TVDILLETAMG+S+ T+D + F+YAMAVMKMCDI+H RH
Sbjct: 165 VEKMRKENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILHLRH 224

Query: 389 YKFWMRSEIVFKLTSFFKQQTKLLGIIHGLTNKVIKNKKETYLENKAKGIIPPTLEELTH 568
            K W+R + +F LT + K Q KLL IIHGLT KVI+ KKE Y   K + II  + ++   
Sbjct: 225 TKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQLKKEEYKSGK-RNIIDNSAQKTES 283

Query: 569 HSGEILANNAKTLSDTVFKGYRDDLDFNDENDVGEKKR 682
            +  I+     +   +V  G +DDLD +D  DVGEKKR
Sbjct: 284 KTNNIVVEGV-SFGQSV--GLKDDLDIDD--DVGEKKR 316


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 515 LENKAKGIIPPTLEELTHHSGEILANNAKTLSDTVFKGYRDDLDFNDENDVG 670
           LEN +   I P L E   H    L N   T   T  K   D +DF+  N +G
Sbjct: 188 LENISLNGIDPELTESEQHR---LQNRLYTNDSTSSKTDDDSIDFDRMNSLG 236


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 515 LENKAKGIIPPTLEELTHHSGEILANNAKTLSDTVFKGYRDDLDFNDENDVG 670
           LEN +   I P L E   H    L N   T   T  K   D +DF+  N +G
Sbjct: 226 LENISLNGIDPELTESEQHR---LQNRLYTNDSTSSKTDDDSIDFDRMNSLG 274


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 143 PTFHINILKSFVG 181
           PT+ +NILKS VG
Sbjct: 126 PTWEVNILKSIVG 138


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +2

Query: 155 INILKSFVGIFNQNSNNVVEKLKSEVGKTFDVHDYMSGTTVDILLETAMGISRKTQDESG 334
           I+ L  F   + Q S   ++++ ++  +  D+ DY      +I + T   I   ++   G
Sbjct: 339 IHRLVYFQNEYEQPSEEDLKRITNQPSEGEDISDYKFRHITEITILTVQLIVEFSKRLPG 398

Query: 335 FDYAM-----AVMKMC 367
           FD  M     A++K C
Sbjct: 399 FDELMREDQIALLKAC 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,537
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)