Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1891
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   4.7  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   6.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   8.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +1

Query: 487 CTADVPQRRAAGVSAEVCVVAAHCDHYPPPLHSWTVTHRAELVPLLH 627
           C    P+R     ++   + A HC+ +    HS +   ++ L+  LH
Sbjct: 106 CMRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRCLH 152


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 421 GEPLHVDPHLIEGH 462
           G P+H+ P L+ GH
Sbjct: 756 GTPVHMAPELLSGH 769


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 421 GEPLHVDPHLIEGH 462
           G P+H+ P L+ GH
Sbjct: 794 GTPVHMAPELLSGH 807


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 113 YFILLRIYVIFYFDFIYLDNLIRSSLVPNSCS 18
           Y IL R  + + FDF   +NLI S+L   S S
Sbjct: 383 YDILARDILGYNFDFQNKNNLIPSALQSYSTS 414


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 113 YFILLRIYVIFYFDFIYLDNLIRSSLVPNSCS 18
           Y IL R  + + FDF   +NLI S+L   S S
Sbjct: 383 YDILARDILGYNFDFQNKNNLIPSALQSYSTS 414


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 421 GEPLHVDPHLIEGH 462
           GE  H DPH   GH
Sbjct: 17  GEIAHNDPHFAPGH 30


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 122 MSFYFILLRIYVIFYF 75
           M+ Y+I++  + IFYF
Sbjct: 73  MNVYYIVILAWAIFYF 88


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 65   YLDNLIRSSL 36
            +LDNLIRSSL
Sbjct: 1283 FLDNLIRSSL 1292


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 327 CASGAKRRIGPSVEDSEQVLQGRCASSHT 413
           C +   R +GP +   EQV + RC    T
Sbjct: 127 CGNFPPRPMGPWISVQEQVPRFRCIGPPT 155


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 150 FSYFMDTIANVLLLYSFEN 94
           F+Y  D     LL+Y F N
Sbjct: 197 FAYIADVTGFALLVYDFRN 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,814
Number of Sequences: 438
Number of extensions: 2976
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)