Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1876
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07696-1|CAA30535.1|  456|Homo sapiens protein ( Human mRNA for ...    30   6.3  
BT007261-1|AAP35925.1|  456|Homo sapiens keratin 15 protein.           30   6.3  
BC002641-1|AAH02641.1|  456|Homo sapiens keratin 15 protein.           30   6.3  
AF202320-1|AAF27047.1|  456|Homo sapiens keratin 15 protein.           30   6.3  

>X07696-1|CAA30535.1|  456|Homo sapiens protein ( Human mRNA for
           cytokeratin 15. ).
          Length = 456

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 607 GLTVSGGNGIRSISSFSDLRSMSTIDGGHFGSGFWV 500
           G ++SGG G RSIS+ S  R +S+  GG +G G  V
Sbjct: 32  GGSLSGGGGSRSISA-SSARFVSSGSGGGYGGGMRV 66


>BT007261-1|AAP35925.1|  456|Homo sapiens keratin 15 protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 607 GLTVSGGNGIRSISSFSDLRSMSTIDGGHFGSGFWV 500
           G ++SGG G RSIS+ S  R +S+  GG +G G  V
Sbjct: 32  GGSLSGGGGSRSISA-SSARFVSSGSGGGYGGGMRV 66


>BC002641-1|AAH02641.1|  456|Homo sapiens keratin 15 protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 607 GLTVSGGNGIRSISSFSDLRSMSTIDGGHFGSGFWV 500
           G ++SGG G RSIS+ S  R +S+  GG +G G  V
Sbjct: 32  GGSLSGGGGSRSISA-SSARFVSSGSGGGYGGGMRV 66


>AF202320-1|AAF27047.1|  456|Homo sapiens keratin 15 protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 607 GLTVSGGNGIRSISSFSDLRSMSTIDGGHFGSGFWV 500
           G ++SGG G RSIS+ S  R +S+  GG +G G  V
Sbjct: 32  GGSLSGGGGSRSISA-SSARFVSSGSGGGYGGGMRV 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,435,524
Number of Sequences: 237096
Number of extensions: 1929483
Number of successful extensions: 5020
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5020
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)