Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1876
(656 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 120 9e-30
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 96 3e-22
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 89 3e-20
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 86 3e-19
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 85 6e-19
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 84 1e-18
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 79 3e-17
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 79 3e-17
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 79 3e-17
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 76 3e-16
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 73 2e-15
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 71 1e-14
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 71 1e-14
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 69 4e-14
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 26 0.36
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 24 1.5
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 1.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 7.8
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 120 bits (290), Expect = 9e-30
Identities = 57/167 (34%), Positives = 99/167 (59%)
Frame = +3
Query: 156 VVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLA 335
+VY W+ ID+ + S E R++ + +I +N L G+ + + +F+T+P+ G+P TL
Sbjct: 156 LVYAWSTIDYTYDSIEARDSAIFDGDFITENNLPLGLEVWRDKVFITLPKWKDGIPVTLT 215
Query: 336 TIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNPD 515
T+P +PKL+P+P+W + +GNC+ L V I++D +WILD+G+V + +
Sbjct: 216 TVPKHSKTKSPKLRPYPNWEWHTVGNCDGLTSVFRIQVDECDRLWILDSGKV-DIAKGGK 274
Query: 516 PKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLVVDNRDGD 656
CPP+I + DL ++ L + + P E V ++ Y N +VVD R+ D
Sbjct: 275 LACPPAIFIFDLTTDTL-IRKYIIPKEQVKEDSLYTN-IVVDIRNED 319
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 160 TTRNCRGLTSVF 125
T NC GLTSVF
Sbjct: 238 TVGNCDGLTSVF 249
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 95.9 bits (228), Expect = 3e-22
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = +3
Query: 168 WNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLATIPI 347
W +D+ + + + +YIP+N L GI + LF+T+PR G+PATL I +
Sbjct: 40 WRTLDYAYPDEASKTMAMMKGEYIPENALPVGIEIWRNKLFVTVPRWRNGIPATLTYISL 99
Query: 348 Q-QVNTAPKLKPFPSWADNAIGNC-NALQFVQNIEIDRNGIMWILDNGRVGTLTQNPDPK 521
+PKL P+P+WA N G C +A+ I D +W+LD G +G +
Sbjct: 100 DTNRGGSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCDRLWVLDTGTIG-IGNTTIQA 158
Query: 522 CPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLVVD 641
CP ++ + DL S+KL + + E +N N T++ ++ VD
Sbjct: 159 CPYTLNIFDLTSDKL-LRQYRLRAEDINMN-TFIANIAVD 196
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 89.0 bits (211), Expect = 3e-20
Identities = 44/168 (26%), Positives = 87/168 (51%)
Frame = +3
Query: 138 NPRQFRVVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAG 317
N + + +Y WN I++ + + R ++ YI +N + +G+ + + +F+T+PR G
Sbjct: 14 NGEEIKTIYSWNVIEYNFPNDNIRNTLISNGDYIEENNMPNGMQIWNDKVFITIPRWKNG 73
Query: 318 VPATLATIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGT 497
VP+ L + +PKL P+P+W N I +++ + + +D +W +D G V
Sbjct: 74 VPSNLNFFLKNDESESPKLNPYPNWEMNDINKIDSIINIIRVRVDACDRLWGVDTG-VDD 132
Query: 498 LTQNPDPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLVVD 641
+ N P I++IDLK++K+ + P ++ ++ DLV+D
Sbjct: 133 ILGNNTVIHQPRIIIIDLKTDKI-LRIYPLKSSDQTSDSFFV-DLVID 178
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 85.8 bits (203), Expect = 3e-19
Identities = 53/177 (29%), Positives = 90/177 (50%)
Frame = +3
Query: 105 QNKTTLPKTDVNPRQFRVVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGEN 284
Q K D F+V Y+W D+ + S E R+A + + +Y +N + ++ +
Sbjct: 17 QAKAHYSLRDFKANIFQVKYQWKYFDYNFGSDEKRQAAIQSGEYNYKNNVPIDVDRWNGK 76
Query: 285 LFLTMPRMLAGVPATLATIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGI 464
F+T+ R GVP++L I + N P L+P+P+W+ NC+ + V I ID
Sbjct: 77 TFVTILRN-DGVPSSLNVISNKIGNGGPLLEPYPNWSWAKNQNCSGITSVYRIAIDEWDR 135
Query: 465 MWILDNGRVGTLTQNPDPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLV 635
+W+LDNG G + CP IV+ DLK+ KL ++++ P + +TT ++V
Sbjct: 136 LWVLDNGISGETS-----VCPSQIVVFDLKNSKL-LKQVKIPHDIAINSTTGKRNVV 186
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 85.0 bits (201), Expect = 6e-19
Identities = 45/161 (27%), Positives = 85/161 (52%)
Frame = +3
Query: 153 RVVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATL 332
+V+YEW IDF++ S E R+A + + ++ ++ + + F+T+ R GVP++L
Sbjct: 38 KVIYEWKHIDFDFGSDERRDAAIKSGEFDHTKNYPFDVDRWRDKTFVTIERN-NGVPSSL 96
Query: 333 ATIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNP 512
+ ++ P L+P+P W+ +C+ + I +D+ +W+LD+G L N
Sbjct: 97 NVVTNKKGKGGPLLRPYPDWSFAKYEDCSGIVSAFKIAVDKFDRLWVLDSG----LVNNN 152
Query: 513 DPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLV 635
P C P ++ DLK+ KL ++++ P TT + +LV
Sbjct: 153 QPMCSPKLLTFDLKTSKL-VKQVEIPHNIAVNATTGMGELV 192
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 84.2 bits (199), Expect = 1e-18
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Frame = +3
Query: 129 TDVNPRQF----RVVYEWNAIDFEWTSPEDREAYLNTSQY-IPQNVLISGINFYGENLFL 293
TD++ R +V+YEW ID+++ S E R+A + + Y N L+ + +G+ F+
Sbjct: 18 TDIHSRNLTNSLKVIYEWKYIDYDFGSDEKRQAAIQSGDYNYTMNYLLD-TDQWGDKTFV 76
Query: 294 TMPRMLAGVPATLATIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWI 473
+ + GVP++L I + N P L P+P W NC+ + IEID +W+
Sbjct: 77 IIMKF-NGVPSSLNVITNKTGNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRLWV 135
Query: 474 LDNGRVGTLTQNPDPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLV 635
LD+G L N CPP +++ DL + +L ++++ P + TT LV
Sbjct: 136 LDSG----LINNVRSVCPPQLLVFDLNTSQL-LKQVKIPHDIAVNTTTEKGALV 184
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 79.4 bits (187), Expect = 3e-17
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Frame = +3
Query: 156 VVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLA 335
+++EW D+++ S E R+ + + +Y +N S I+ + + +F+TM R GVP++L
Sbjct: 33 ILHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRY-NGVPSSLN 91
Query: 336 TIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNPD 515
I + + P L+P+P W+ +C+ + + ID+ +W+LD+G L N
Sbjct: 92 VISKKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSG----LVNNTQ 147
Query: 516 PKCPPSIVLIDLKSEKLEMERIPFPPE-TVNPNT--TYLNDLVVDNRD 650
P C P ++ DL + +L ++++ P + VN T L+ L V + D
Sbjct: 148 PMCSPKLLTFDLTTSQL-LKQVEIPHDVAVNATTGKGRLSSLAVQSLD 194
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 79.4 bits (187), Expect = 3e-17
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Frame = +3
Query: 156 VVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLA 335
+++EW D+++ S E R+ + + +Y +N S I+ + + +F+TM R GVP++L
Sbjct: 33 ILHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRY-NGVPSSLN 91
Query: 336 TIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNPD 515
I + + P L+P+P W+ +C+ + + ID+ +W+LD+G L N
Sbjct: 92 VISKKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSG----LVNNTQ 147
Query: 516 PKCPPSIVLIDLKSEKLEMERIPFPPE-TVNPNT--TYLNDLVVDNRD 650
P C P ++ DL + +L ++++ P + VN T L+ L V + D
Sbjct: 148 PMCSPKLLTFDLTTSQL-LKQVEIPHDVAVNATTGKGRLSSLAVQSLD 194
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 79.4 bits (187), Expect = 3e-17
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Frame = +3
Query: 156 VVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLA 335
+++EW D+++ S E R+ + + +Y +N S I+ + + +F+TM R GVP++L
Sbjct: 33 ILHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRY-NGVPSSLN 91
Query: 336 TIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNPD 515
I + + P L+P+P W+ +C+ + + ID+ +W+LD+G L N
Sbjct: 92 VISKKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSG----LVNNTQ 147
Query: 516 PKCPPSIVLIDLKSEKLEMERIPFPPE-TVNPNT--TYLNDLVVDNRD 650
P C P ++ DL + +L ++++ P + VN T L+ L V + D
Sbjct: 148 PMCSPKLLTFDLTTSQL-LKQVEIPHDVAVNATTGKGRLSSLAVQSLD 194
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 76.2 bits (179), Expect = 3e-16
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Frame = +3
Query: 159 VYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYG----ENLFLTMPRMLAGVPA 326
+Y W A++F + + + A + + YIP L ++ Y +F+ +PR+ GVP
Sbjct: 27 IYSWKALEFAFPNGYAKLAAIKSGSYIPGASLPIDVDVYNTEQQSTVFVAIPRIQDGVPL 86
Query: 327 TLATIPIQ-QVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLT 503
TL + + ++ P + P+P+W+ N + C+ L V +++D+ G +WILD G +G
Sbjct: 87 TLGYVTREVSIDGNPLIAPYPNWSYNDVKYCDGLTSVYRMQVDKCGRLWILDTGILG--- 143
Query: 504 QNPDPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLVVDNRD 650
C P I + L KL + FP ++ ++ + VD RD
Sbjct: 144 --EKQICRPKIHVFSLHDNKL-ITMYRFPQNQFKESSLFVT-IAVDVRD 188
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 72.9 bits (171), Expect = 2e-15
Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Frame = +3
Query: 105 QNKTTLPKTDVNPRQF----RVVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINF 272
Q T++ + +PR+ V++EW +D+++ S E R+A + + +Y ++
Sbjct: 16 QGITSVTVRENSPRKLANSMNVIHEWKYLDYDFGSDERRQAAMQSGEYDHTKNYPFDVDQ 75
Query: 273 YGENLFLTMPRMLAGVPATLATIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEID 452
+ F+T+PR GVP++L I + N L+P+P W+ +C+ + I ID
Sbjct: 76 WRGMTFVTVPRY-KGVPSSLNVISEKIGNGGRLLQPYPDWSWANYKDCSGIVSAYKIAID 134
Query: 453 RNGIMWILDNGRVGTLTQNPDPKCPPSIVLIDLKSEKLEMERIPFPPE-TVNPNT 614
+ +WILD+G + N P C P + + DL + +++++ P + VN +T
Sbjct: 135 KFDRLWILDSG----IINNTQPMCSPKLHVFDLNTSH-QLKQVVMPHDIAVNAST 184
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 70.9 bits (166), Expect = 1e-14
Identities = 40/165 (24%), Positives = 77/165 (46%)
Frame = +3
Query: 156 VVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLA 335
V+++W +D+++ + E R+A + + +Y ++ + FL + R GVP++L
Sbjct: 38 VIHKWKYLDYDFDNDERRQAAIQSGEYDRTKNYPLDVDQWHNKTFLAVIRY-NGVPSSLN 96
Query: 336 TIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNPD 515
+ + N L+P+P W+ +C+ + I ID +W+LD+G L N
Sbjct: 97 VVSDKTGNGGRLLQPYPDWSFAKYEDCSGIVSAHKIAIDEYERLWVLDSG----LVNNTQ 152
Query: 516 PKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLVVDNRD 650
P C P + DL + +L ++++ P + L L V D
Sbjct: 153 PMCSPKLFAFDLNTSQL-LKQVEIPHDVATTGKGELVSLTVQAMD 196
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 70.9 bits (166), Expect = 1e-14
Identities = 44/164 (26%), Positives = 78/164 (47%)
Frame = +3
Query: 144 RQFRVVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVP 323
+ V++EW D+++ S E R+A + + +Y ++ + + F+T+ R GVP
Sbjct: 30 KSLNVIHEWKYFDYDFGSEERRQAAIQSGEYDHTKNYPFDVDQWRDKTFVTILRY-DGVP 88
Query: 324 ATLATIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLT 503
+TL I + LKP+P W+ +C+ + I ID+ +W+LD+G L
Sbjct: 89 STLNVISGKTGKGGRLLKPYPDWSFAEFKDCSKIVSAFKIAIDKFDRLWVLDSG----LV 144
Query: 504 QNPDPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLNDLV 635
P C P + + DLK+ +++I P + TT LV
Sbjct: 145 NRTVPVCAPKLHVFDLKTSN-HLKQIEIPHDIAVNATTGKGGLV 187
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 68.9 bits (161), Expect = 4e-14
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Frame = +3
Query: 156 VVYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLA 335
V++EW ID+++ S E R+A + + +Y ++ + FL + R GVP++L
Sbjct: 37 VIHEWKYIDYDFGSDEKRQAAIQSGEYDYTKNYPFDVDQWHNKTFLAVIRY-DGVPSSLN 95
Query: 336 TIPIQQVNTAPKLKPFPSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTLTQNPD 515
I + N L+P+P W+ +C+ + I ID+ +W+LD+G L N
Sbjct: 96 VISEKIGNGGCLLQPYPDWSWANYKDCSGIVSAYKIAIDKFDRLWVLDSG----LINNIQ 151
Query: 516 PKCPPSIVLIDLKSEKLEMERIPFPPE-TVNPNT 614
C P ++ DL + KL +++I P VN +T
Sbjct: 152 LMCSPKLLAFDLNTSKL-LKQIEIPHNIAVNAST 184
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.8 bits (54), Expect = 0.36
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -2
Query: 508 FWVRVPTRPLSRIHIIPFLSISMF*TNCRALQ-LPMALSAQLGKGFSFGAVFTCCIGIVA 332
F VR RP + +++ L++S C AL +PMAL ++ +SFG + C + +
Sbjct: 67 FLVRKLRRPCN--YLLVSLAVSDL---CVALLVMPMALLYEISGNWSFGTIM-CDLWVSF 120
Query: 331 NVAGTPANILGI 296
+V A+IL +
Sbjct: 121 DVLSCTASILNL 132
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 531 SIVLIDL-KSEKLEMERIPFPPETVNP 608
S+VL+D + EKLE + PF E P
Sbjct: 14 SVVLLDTTQEEKLEWTKYPFGAEANTP 40
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 248 VLGYILARIEVGLAIFWRRPFEIDCV 171
+L I+ ++ VG+ I W PF I C+
Sbjct: 270 ILNEIIMKL-VGIIIMWYSPFGIMCL 294
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 568 SSFSDLRSMSTIDGGHFGSGFWVRVPTRPLSRIH 467
+S DL S DG FG + P P +H
Sbjct: 414 ASKEDLSPSSLADGARFGGSCLIHGPPLPPLPLH 447
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 568 SSFSDLRSMSTIDGGHFGSGFWVRVPTRPLSRIH 467
+S DL S DG FG + P P +H
Sbjct: 414 ASKEDLSPSSLADGARFGGSCLIHGPPLPPLPLH 447
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 502 PRTLTRSVLRQSCSSILNLKNLKWNGFRSRQK 597
P TLT S+L + + L LK FRS K
Sbjct: 636 PPTLTESLLNRHNEDMEKLMMLKHREFRSSIK 667
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 477 DNGRVGTLTQNPDPKCPPSIVLID 548
D G +G L PD P IVL +
Sbjct: 94 DYGGIGVLRLPPDKVWKPDIVLFN 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,324
Number of Sequences: 438
Number of extensions: 3656
Number of successful extensions: 32
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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