Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1872
(643 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 72 4e-15
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 70 2e-14
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 69 4e-14
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 51 8e-09
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 49 3e-08
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 49 3e-08
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 46 3e-07
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 46 3e-07
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 46 3e-07
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 42 7e-06
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.7
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 72.1 bits (169), Expect = 4e-15
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +1
Query: 409 FVQYNNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYPSLRE--- 579
++ N +P+G+E ++LF+TVPR R GIP+TL Y+ L T+ SP L PYP+ +
Sbjct: 62 YIPENALPVGIEIWRNKLFVTVPRWRNGIPATLTYISLDTNRG-GSPKLTPYPNWAQNKA 120
Query: 580 ---GSSLVSVYRTRADECGRLWMV 642
GS++ + YR AD C RLW++
Sbjct: 121 GACGSAITTAYRIHADSCDRLWVL 144
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 496 PSTLNYVDLTTDSNTRSPALR 558
P TLN DLT+D R LR
Sbjct: 160 PYTLNIFDLTSDKLLRQYRLR 180
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 69.7 bits (163), Expect = 2e-14
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Frame = +1
Query: 409 FVQYNNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYP-----SL 573
F+ NN+P+G+E D++FIT+P+ + GIP TL V S T+SP LRPYP ++
Sbjct: 182 FITENNLPLGLEVWRDKVFITLPKWKDGIPVTLTTV--PKHSKTKSPKLRPYPNWEWHTV 239
Query: 574 REGSSLVSVYRTRADECGRLWMV 642
L SV+R + DEC RLW++
Sbjct: 240 GNCDGLTSVFRIQVDECDRLWIL 262
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 68.9 bits (161), Expect = 4e-14
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Frame = +1
Query: 304 LSNRGDLPLRPSWNLFRPEIVRPFVKPVENETGRFFVQYNNVPMGVEKVGDRLFITVPRR 483
L+N ++ SWN+ ++ G + ++ NN+P G++ D++FIT+PR
Sbjct: 12 LANGEEIKTIYSWNVIEYNFPNDNIRNTLISNGDY-IEENNMPNGMQIWNDKVFITIPRW 70
Query: 484 RYGIPSTLNYVDLTTDSNTRSPALRPYPS-----LREGSSLVSVYRTRADECGRLWMV 642
+ G+PS LN+ + + SP L PYP+ + + S++++ R R D C RLW V
Sbjct: 71 KNGVPSNLNF--FLKNDESESPKLNPYPNWEMNDINKIDSIINIIRVRVDACDRLWGV 126
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 197 VSCFQANTSVNFPTFLLI 144
++C+ NT +N TF+L+
Sbjct: 321 IACWDTNTELNPNTFILV 338
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 51.2 bits (117), Expect = 8e-09
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Frame = +1
Query: 460 LFITVPRRRYGIPSTLNYV--DLTTDSNTRSPALRPYPS-----LREGSSLVSVYRTRAD 618
+F+ +PR + G+P TL YV +++ D N P + PYP+ ++ L SVYR + D
Sbjct: 73 VFVAIPRIQDGVPLTLGYVTREVSIDGN---PLIAPYPNWSYNDVKYCDGLTSVYRMQVD 129
Query: 619 ECGRLWMV 642
+CGRLW++
Sbjct: 130 KCGRLWIL 137
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-08
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +1
Query: 409 FVQYNNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYP-----SL 573
F N P V++ D+ F+T+ R G+PS+LN V T P LRPYP
Sbjct: 65 FDHTKNYPFDVDRWRDKTFVTIERNN-GVPSSLNVV--TNKKGKGGPLLRPYPDWSFAKY 121
Query: 574 REGSSLVSVYRTRADECGRLWMV 642
+ S +VS ++ D+ RLW++
Sbjct: 122 EDCSGIVSAFKIAVDKFDRLWVL 144
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 49.2 bits (112), Expect = 3e-08
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +1
Query: 421 NNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYPSL-----REGS 585
NNVP+ V++ + F+T+ R G+PS+LN + + P L PYP+ + S
Sbjct: 64 NNVPIDVDRWNGKTFVTILRND-GVPSSLNVI--SNKIGNGGPLLEPYPNWSWAKNQNCS 120
Query: 586 SLVSVYRTRADECGRLWMV 642
+ SVYR DE RLW++
Sbjct: 121 GITSVYRIAIDEWDRLWVL 139
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 46.0 bits (104), Expect = 3e-07
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +1
Query: 421 NNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYPSLR-----EGS 585
NN P +++ D++F+T+ R G+PS+LN + P L+PYP + S
Sbjct: 63 NNYPSDIDQWHDKIFVTMLRYN-GVPSSLNVISKKVGDG--GPLLQPYPDWSFAKYDDCS 119
Query: 586 SLVSVYRTRADECGRLWMV 642
+VS + D+C RLW++
Sbjct: 120 GIVSASKLAIDKCDRLWVL 138
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 46.0 bits (104), Expect = 3e-07
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +1
Query: 421 NNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYPSLR-----EGS 585
NN P +++ D++F+T+ R G+PS+LN + P L+PYP + S
Sbjct: 63 NNYPSDIDQWHDKIFVTMLRYN-GVPSSLNVISKKVGDG--GPLLQPYPDWSFAKYDDCS 119
Query: 586 SLVSVYRTRADECGRLWMV 642
+VS + D+C RLW++
Sbjct: 120 GIVSASKLAIDKCDRLWVL 138
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 46.0 bits (104), Expect = 3e-07
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +1
Query: 421 NNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYPSLR-----EGS 585
NN P +++ D++F+T+ R G+PS+LN + P L+PYP + S
Sbjct: 63 NNYPSDIDQWHDKIFVTMLRYN-GVPSSLNVISKKVGDG--GPLLQPYPDWSFAKYDDCS 119
Query: 586 SLVSVYRTRADECGRLWMV 642
+VS + D+C RLW++
Sbjct: 120 GIVSASKLAIDKCDRLWVL 138
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 41.5 bits (93), Expect = 7e-06
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 424 NVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPYPSL-----REGSS 588
N + ++ GD+ F+ + + G+PS+LN + T + P L PYP S
Sbjct: 62 NYLLDTDQWGDKTFVIIMKFN-GVPSSLNVI--TNKTGNGGPLLAPYPDWTWAKNENCSG 118
Query: 589 LVSVYRTRADECGRLWMV 642
+ S Y+ D C RLW++
Sbjct: 119 ITSAYKIEIDMCDRLWVL 136
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 631 VCRIHQLLFYKQTPENYPPSG*GKVSKPATVCWSPSL 521
V + ++ FYK+ P+ + G SK T+ SP++
Sbjct: 572 VWTVDEVEFYKRRPQRACSTTGGVPSKSPTLTHSPTM 608
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 313 RGDLPLRPSW 342
RGDLPL SW
Sbjct: 636 RGDLPLSISW 645
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,647
Number of Sequences: 438
Number of extensions: 3658
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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