Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1826
(645 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 35 6e-04
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 35 6e-04
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.9
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 3.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 3.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 4.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.8
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 22 5.8
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 22 5.8
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 22 5.8
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 5.8
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 35.1 bits (77), Expect = 6e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = +3
Query: 288 CPTDDCSQATPDGHCRYFW-----SILFVVECRPSCRCIEGFWRN-KGVCVPYNKC 437
CP+++ DG C+ F L + C P C C G+ RN K VCVP +KC
Sbjct: 37 CPSNEIFSRC-DGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 27.1 bits (57), Expect = 0.16
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Frame = +3
Query: 12 IFIVLIGHCFGDKQCGPSEQLNTCPSACTTGRCPESHDEF-KNCSDGGKCLE---SRCDC 179
+F +L+G G G CPS RC F N C++ C C
Sbjct: 14 VFSMLVGGFGGFGGFGGLGGRGKCPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVC 73
Query: 180 QFNYRRAANNTCIPIASC 233
+ Y R C+P + C
Sbjct: 74 RLGYLRNKKKVCVPRSKC 91
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 35.1 bits (77), Expect = 6e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = +3
Query: 288 CPTDDCSQATPDGHCRYFW-----SILFVVECRPSCRCIEGFWRN-KGVCVPYNKC 437
CP+++ DG C+ F L + C P C C G+ RN K VCVP +KC
Sbjct: 37 CPSNEIFSRC-DGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 27.5 bits (58), Expect = 0.12
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Frame = +3
Query: 12 IFIVLIGHCFGDKQCGPSEQLNTCPSACTTGRCPESHDEF-KNCSDGGKCLE---SRCDC 179
IF +L+G G G CPS RC F N C++ C C
Sbjct: 14 IFSMLVGGFGGFGGFGGLGGRGKCPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVC 73
Query: 180 QFNYRRAANNTCIPIASC 233
+ Y R C+P + C
Sbjct: 74 RLGYLRNKKKVCVPRSKC 91
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 271 TYSSFAPVQLNLGQLAMGIQVLFA 200
TY + VQLNL L G+Q+ A
Sbjct: 110 TYPTVLEVQLNLPILKDGVQIFIA 133
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 271 TYSSFAPVQLNLGQLAMGIQVLFA 200
TY + VQLNL L G+Q+ A
Sbjct: 148 TYPTVLEVQLNLPILKDGVQIFIA 171
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 530 LNSQIYIYLTYRPTKHRQITLVLHFTFMYDRKKHI 634
+N Q+Y+Y HR T ++ MY+ H+
Sbjct: 133 VNEQMYLYALSVAVIHRPDTKLMKLPPMYEVMPHL 167
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 530 LNSQIYIYLTYRPTKHRQITLVLHFTFMYDRKKHI 634
+N Q+Y+Y HR T ++ MY+ H+
Sbjct: 133 VNEQMYLYALSVAVIHRPDTKLMKLPPMYEVMPHL 167
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -2
Query: 395 PFNATARRSTFHYK*YAPKITTVTVRSGLGTVVCGAVWWTGYVLFVRSS 249
P+N R T Y P+ ++ + + + G V W + +F RSS
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIF-RSS 130
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 296 CGAVWWTGYVLFVRSSTIKFGATG 225
CG++W + F R + I G +G
Sbjct: 137 CGSIWTMTMIAFDRYNVIVKGLSG 160
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 296 CGAVWWTGYVLFVRSSTIKFGATG 225
CG++W + F R + I G +G
Sbjct: 103 CGSIWTMTMIAFDRYNVIVKGLSG 126
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 378 KKVYIPLQIVCSKNNDSDRQ 319
KK L+ VCSK ND+ ++
Sbjct: 33 KKTIKNLRKVCSKKNDTPKE 52
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 378 KKVYIPLQIVCSKNNDSDRQ 319
KK L+ VCSK ND+ ++
Sbjct: 7 KKTIKNLRKVCSKKNDTPKE 26
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 296 CGAVWWTGYVLFVRSSTIKFGATG 225
CG++W + F R + I G +G
Sbjct: 13 CGSIWTMTMIAFDRYNVIVKGLSG 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,573
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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