Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1769
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 52 4e-09
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 52 4e-09
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 40 2e-05
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.55
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.96
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.9
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 52.4 bits (120), Expect = 4e-09
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
Frame = +2
Query: 98 IKELKRSHSSKYTIE--ASNTAGTSSVEVTLKVYDKPSKPEGPVI---MREISRESVTIE 262
I ELK + ++YTI A AG S L V +P +P GP I R +S + I
Sbjct: 969 IDELKPA--TRYTIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILIT 1026
Query: 263 WKPPL------DDGGLELTKYAIEKHEPDNNRWIKVADVDRDVETYCIQKLNENCEYMFR 424
W PPL D G + P N D + + L +Y
Sbjct: 1027 WSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTGLRPYTKYTLV 1086
Query: 425 VIAQNPVGFSEALESEPIVIKTALDVPSXXXXXXXXXXIDNESVYITWFPSEKNGGSPII 604
V A N VG SEP++ +T DVPS + ++S+ ++W P + II
Sbjct: 1087 VQAYNQVGSGPL--SEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNGII 1144
Query: 605 D-YKV 616
YK+
Sbjct: 1145 QGYKL 1149
Score = 27.5 bits (58), Expect = 0.14
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 194 DKPSKPEGPVIMREISRESVTIEWKPPLDDGGLELTKYAIEKHEPDNNRWIKVADVDRDV 373
D P P ++ S +++ I W PPL+ G+ +TKY + D +
Sbjct: 1212 DVPGSPADIKVVVS-SPQALFISWLPPLEPNGI-ITKYNLYTRVVDGREELNHGKRTLPA 1269
Query: 374 E-TYC-IQKLNENCEYMFRVIAQNPVG 448
+ TY L ++ EY F V VG
Sbjct: 1270 KNTYFEATDLQQHVEYQFWVTGSTRVG 1296
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 554 VYITWFPSEKNGGSPIIDYKVEIKQE 631
V +TW K +P +Y+V +K+E
Sbjct: 837 VTVTWLKGGKIELNPSTNYRVTVKRE 862
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 52.4 bits (120), Expect = 4e-09
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
Frame = +2
Query: 98 IKELKRSHSSKYTIE--ASNTAGTSSVEVTLKVYDKPSKPEGPVI---MREISRESVTIE 262
I ELK + ++YTI A AG S L V +P +P GP I R +S + I
Sbjct: 965 IDELKPA--TRYTIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILIT 1022
Query: 263 WKPPL------DDGGLELTKYAIEKHEPDNNRWIKVADVDRDVETYCIQKLNENCEYMFR 424
W PPL D G + P N D + + L +Y
Sbjct: 1023 WSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTGLRPYTKYTLV 1082
Query: 425 VIAQNPVGFSEALESEPIVIKTALDVPSXXXXXXXXXXIDNESVYITWFPSEKNGGSPII 604
V A N VG SEP++ +T DVPS + ++S+ ++W P + II
Sbjct: 1083 VQAYNQVGSGPL--SEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNGII 1140
Query: 605 D-YKV 616
YK+
Sbjct: 1141 QGYKL 1145
Score = 27.5 bits (58), Expect = 0.14
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 194 DKPSKPEGPVIMREISRESVTIEWKPPLDDGGLELTKYAIEKHEPDNNRWIKVADVDRDV 373
D P P ++ S +++ I W PPL+ G+ +TKY + D +
Sbjct: 1208 DVPGSPADIKVVVS-SPQALFISWLPPLEPNGI-ITKYNLYTRVVDGREELNHGKRTLPA 1265
Query: 374 E-TYC-IQKLNENCEYMFRVIAQNPVG 448
+ TY L ++ EY F V VG
Sbjct: 1266 KNTYFEATDLQQHVEYQFWVTGSTRVG 1292
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 554 VYITWFPSEKNGGSPIIDYKVEIKQE 631
V +TW K +P +Y+V +K+E
Sbjct: 833 VTVTWLKGGKIELNPSTNYRVTVKRE 858
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 40.3 bits (90), Expect = 2e-05
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Frame = +2
Query: 107 LKRSHSSKYTIEASNTAGTSSVEVTLKVYDKPSKPEGPVIMREI--SRESVTIEWKPPLD 280
LK+ + + A + G + + PE P+ ++ + S ES+ + W+PP
Sbjct: 1146 LKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQ 1205
Query: 281 DGGLELTKYAIEKHEPDNNRWIKVADVDRDVETYCIQKLNENCEYMFRVIAQNPVGFSEA 460
G+ +T+Y + + DN V + T+ +L++ Y F V A +G EA
Sbjct: 1206 PNGV-ITQYTVYT-KADNAEEPTSQKVPPNQLTHEASELDKTRRYDFWVTASTNIGEGEA 1263
Query: 461 LESEPIVIKTALDVPS 508
S+ + + ++ VP+
Sbjct: 1264 --SKIVALAPSVRVPA 1277
Score = 37.1 bits (82), Expect = 2e-04
Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Frame = +2
Query: 86 SVIRIKELKRSHSSKYTIEASNTAGTSSVEVTLKVYDKPSKPEGP---VIMREISRESVT 256
+V + L+ + + I A N G S T+ + P GP + + ++ + ++
Sbjct: 935 NVAGVFNLRPATTYHLRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTLK 994
Query: 257 IEWK-PPLDDGGLELTKYAIEKHEPDNNRWIKVADVD---RDVETYCIQKLNENCEYMFR 424
+ WK PP +D E+ Y + + + VD D + + +Q +N +
Sbjct: 995 VTWKPPPREDWNGEILGYYVGYRLSSSEKPYMFETVDFSKEDGKEHHLQIMNLKTYTQYS 1054
Query: 425 VIAQ--NPVGFSEALESEPIVIKTALDVPSXXXXXXXXXXIDNESVYITWF-PSEKNGGS 595
V+ Q N VG SE TA VP + ++++ I+W P
Sbjct: 1055 VVVQAFNKVGSGPM--SEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANG 1112
Query: 596 PIIDYKVEIKQEG 634
I YKV + G
Sbjct: 1113 VITGYKVIVIPSG 1125
Score = 25.4 bits (53), Expect = 0.55
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 74 KEKTSVIRIKELKRSHSSKYTIEASNTAGTSSVEVTLKV 190
++ + + I+E + S KY +N+ G SVE L V
Sbjct: 266 RQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTV 304
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.4 bits (53), Expect = 0.55
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 149 NTAGTSSVEVTLK--VYDKPSKPEGPVIMREISRESVTIEWKPPLDDGGLELTKYAIEKH 322
NT G + ++T + + K GP I +++ + +E + PL LT KH
Sbjct: 168 NTQGIALADLTQRAQIGQKHKLLIGPSIRITPAKKRIKLE-QSPLCPPAPRLTNSNSIKH 226
Query: 323 EPDNNRWIKVADVDRDVET 379
E DN+ + D +R T
Sbjct: 227 ESDNSDYSHTTDENRHSST 245
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 24.6 bits (51), Expect = 0.96
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -1
Query: 338 DYYRVHVFRWRILLALDLRHLKVVSIQL*LIHDLFRAL 225
D Y FR+RI L HL V I+ L LFR L
Sbjct: 240 DPYNTKFFRYRITPELYSEHLVVPEIEDNLETSLFRPL 277
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 62 YITTKEKTSVI-RIKELKRSHSSKYTIEASNTAGTSSVEVTLKVYDKPSKPEGP 220
Y T EK V+ R K +S S+ SNT+ T + L+ D S GP
Sbjct: 70 YSHTHEKKLVLERSKTKSKSPESRDRSNTSNTSKTFILSDKLESSDDTSLFRGP 123
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,887
Number of Sequences: 438
Number of extensions: 4088
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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