Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1749
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.40 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 338  KQPEAASSKPEQQQPREQ 391
            +QP+  S +P+QQQP+ Q
Sbjct: 1515 QQPQQQSQQPQQQQPQPQ 1532



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 338  KQPEAASSKPEQQQPREQ 391
            +QP+    + +QQQP++Q
Sbjct: 1503 QQPQQQQQQQQQQQPQQQ 1520



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 335  AKQPEAASSKPEQQQPREQ 391
            ++QP+    +P+QQQ ++Q
Sbjct: 1521 SQQPQQQQPQPQQQQQQQQ 1539



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 320  TKTGPAKQPEAASSKPEQQQPREQMV 397
            T T   +QP+    + +QQQ ++Q +
Sbjct: 1442 TLTSAPQQPQQQQQQQQQQQQQQQQL 1467



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 341  QPEAASSKPEQQQPREQ 391
            QP+    + +QQQP++Q
Sbjct: 1530 QPQQQQQQQQQQQPQQQ 1546


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 335 AKQPEAASSKPEQQQPREQMVPIVTSP 415
           A Q       P QQQ  +Q   +VTSP
Sbjct: 213 ASQQSQPGMHPRQQQQAQQHQGVVTSP 239


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 546 YKPNSFKSDRCSSLANNGQ 490
           YK N  K D+CS+  +NG+
Sbjct: 144 YKSN-LKCDKCSTYQSNGE 161



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 702 VESTAFTHTGAEGDFQQWRERELVS 628
           VE     H G+  DF+  R RE V+
Sbjct: 416 VEGIKLAHGGSSKDFKTTRTREQVT 440


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 702 VESTAFTHTGAEGDFQQWRERELVS 628
           VE     H G+  DF+  R RE V+
Sbjct: 331 VEGIKLAHGGSSKDFKTTRTREQVT 355


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 702 VESTAFTHTGAEGDFQQWRERELVS 628
           VE     H G+  DF+  R RE V+
Sbjct: 650 VEGIKLAHGGSSKDFKTTRTREQVT 674


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 221 VNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKT 328
           VN+ V   S + VLTVTAP       G  I P T+T
Sbjct: 289 VNNSVGGESVETVLTVTAP------LGAEIEPSTQT 318


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -3

Query: 608 LSCCESFIDIYYRTLFCIPLCINLIRS-NRIVARRWPTTGRKQK 480
           L  C S++D  Y   F  P+ + ++ +   ++ R+ P    + K
Sbjct: 805 LLVCNSYVDASYMIAFAYPIMLIVVCTVYAVLTRKIPEAFNESK 848


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,860
Number of Sequences: 438
Number of extensions: 3980
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)