Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1739
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.8  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    23   2.8  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   3.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   8.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   8.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 154 SSFMREFNDSRHALD 110
           S +MRE+ND  + LD
Sbjct: 208 SKYMREYNDPEYKLD 222


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 404 ACIWPCLVQGRSDGQMEPHPSSCRRT 327
           AC   CL  G++ G  E     CR+T
Sbjct: 59  ACAANCLSLGKAGGHCEKGVCICRKT 84


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 404 ACIWPCLVQGRSDGQMEPHPSSCRRT 327
           AC   CL  G++ G  E     CR+T
Sbjct: 59  ACAANCLSLGKAGGHCEKVGCICRKT 84


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 335 GMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQS 454
           GMK++ V   R    E+D ++ + +S+  S   IE  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 335 GMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQS 454
           GMK++ V   R    E+D ++ + +S+  S   IE  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 353 PHPSSCRRTPRSF 315
           P P SC  TP SF
Sbjct: 655 PRPISCHTTPDSF 667


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +2

Query: 38  NFEEKRVKYEDEEITEDLLNAWVFVQSMPTIVEFSHETASKIFGGKIKY 184
           NF EK  +   + + +D     + V+  P      H   SKIF   +KY
Sbjct: 78  NFNEKNTRDIVQAVLDDNETDQLIVECSPISDANVHIKISKIFQCFMKY 126


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 207 RKMAISRNTLRI*SRSRRPTAT 272
           +K AIS N+LR  SRS + T++
Sbjct: 208 KKYAISSNSLRSRSRSFQRTSS 229


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 328 LQDPLVFIFVGIDGDG 281
           LQ+P  +I+  + GDG
Sbjct: 168 LQEPSFYIYPSLQGDG 183


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 328 LQDPLVFIFVGIDGDG 281
           LQ+P  +I+  + GDG
Sbjct: 168 LQEPSFYIYPSLQGDG 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,942
Number of Sequences: 438
Number of extensions: 3510
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)