Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1694
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.0  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = -1

Query: 629 RLAKIFLFQLKHGHFTTKSIKIYMI*YLAKLLCYMNS*TNKQSTNILCSGLLQYDIRIIL 450
           R A  F F + +    TK+ +I  I   +K      S  + +S  I+CSGL+   I I  
Sbjct: 725 RFAAGFCFTVVYAALLTKTNRISRIFNASKHSAKRPSFISPRSQLIICSGLVFVQILI-- 782

Query: 449 **QNCTFMMID 417
              N  +M+ID
Sbjct: 783 ---NGVWMIID 790


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 66  SHQYMSKYSLHCMINPRADSC 4
           S +Y S YSLH + + R  SC
Sbjct: 431 SGRYYSAYSLHHVRSSRESSC 451


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 233 MFNETKNLY*ISNSDQNMFKEKMLSNN 313
           +  E KN   +SN+D  +++  M +NN
Sbjct: 362 IIQEMKNDVLLSNNDVYLYQNTMSNNN 388


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 233 MFNETKNLY*ISNSDQNMFKEKMLSNN 313
           +  E KN   +SN+D  +++  M +NN
Sbjct: 400 IIQEMKNDVLLSNNDVYLYQNTMSNNN 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,171
Number of Sequences: 438
Number of extensions: 4679
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)